RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 HOXB9P17482 250 aaPredicted RBP18.1■□□□□ 0.49
COL9A3-202ENST00000452372 BMP7P18075 431 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 MSX1P28360 303 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 CRYZQ08257 329 aaKnown RBP18.1■□□□□ 0.49
COL9A3-202ENST00000452372 SF3A3Q12874 501 aaKnown RBP eCLIP18.1■□□□□ 0.497e-7■■■■□ 21.5
COL9A3-202ENST00000452372 GANABQ14697 944 aaKnown RBP18.1■□□□□ 0.49
COL9A3-202ENST00000452372 GTDC1Q4AE62 458 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 PAGE3Q5JUK9 113 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 COX20Q5RI15 118 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 LRIF1Q5T3J3 769 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 MTERF4Q7Z6M4 381 aaKnown RBP18.1■□□□□ 0.49
COL9A3-202ENST00000452372 OR5M9Q8NGP3 310 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 TSPEARQ8WU66 669 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 TIMP4Q99727 224 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 SAP130Q9H0E3 1048 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 POLE3Q9NRF9 147 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 MRGBPQ9NV56 204 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 DKKL1Q9UK85 242 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 DTNAQ9Y4J8 743 aa18.1■□□□□ 0.49
COL9A3-202ENST00000452372 ADGRG4Q8IZF6 3080 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 ACTL6AO96019 429 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 GCKP35557 465 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 FUT5Q11128 374 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 CDSNQ15517 529 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 GPR68Q15743 365 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 CD226Q15762 336 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 ZNF141Q15928 474 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.09■□□□□ 0.49
COL9A3-202ENST00000452372 C3P1Q6ZMU1 363 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 IFNEQ86WN2 208 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 ZNF808Q8N4W9 903 aaPredicted RBP18.09■□□□□ 0.49
COL9A3-202ENST00000452372 GATSQ8NAP1 163 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 PHF10Q8WUB8 498 aaKnown RBP18.09■□□□□ 0.49
COL9A3-202ENST00000452372 ABTB1Q969K4 478 aaPredicted RBP18.09■□□□□ 0.49
COL9A3-202ENST00000452372 AURKBQ96GD4 344 aaPredicted RBP18.09■□□□□ 0.49
COL9A3-202ENST00000452372 TRNT1Q96Q11 434 aaKnown RBP18.09■□□□□ 0.49
COL9A3-202ENST00000452372 DMRTA2Q96SC8 542 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 UGT2B28Q9BY64 529 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 SLAMF8Q9P0V8 285 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 MKLN1Q9UL63 735 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 WDR45Q9Y484 360 aa18.09■□□□□ 0.49
COL9A3-202ENST00000452372 FIGNL2A6NMB9 653 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 H3BNH8 94 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 CLIC1O00299 241 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 WDR1O75083 606 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 UGT2B17O75795 530 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 GFRA1P56159 465 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 ZNF630Q2M218 657 aaPredicted RBP18.08■□□□□ 0.48
COL9A3-202ENST00000452372 GLYR1Q49A26 553 aaPredicted RBP18.08■□□□□ 0.48
COL9A3-202ENST00000452372 GPAT3Q53EU6 434 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 TYW3Q6IPR3 259 aaKnown RBP18.08■□□□□ 0.48
COL9A3-202ENST00000452372 ZNF585AQ6P3V2 769 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 OLIG3Q7RTU3 272 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 PHOSPHO1Q8TCT1 267 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 C10orf82Q8WW14 230 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 OIT3Q8WWZ8 545 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 C1GALT1C1Q96EU7 318 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 PRDM14Q9GZV8 571 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 SLC25A37Q9NYZ2 338 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 KCNE5Q9UJ90 142 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 LEF1Q9UJU2 399 aaPredicted RBP18.08■□□□□ 0.48
COL9A3-202ENST00000452372 NDUFAF1Q9Y375 327 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 POLQO75417 2590 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 CSMD2Q7Z408 3487 aa18.08■□□□□ 0.48
COL9A3-202ENST00000452372 PHF3Q92576 2039 aaKnown RBP18.08■□□□□ 0.48
COL9A3-202ENST00000452372 KIAA0513O60268 411 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 H6PDO95479 791 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 SNRPB2P08579 225 aaKnown RBP18.07■□□□□ 0.48
COL9A3-202ENST00000452372 HOXD4P09016 255 aaPredicted RBP18.07■□□□□ 0.48
COL9A3-202ENST00000452372 ETFAP13804 333 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 GABRA1P14867 456 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 HK1P19367 917 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 CHMP24386 653 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 ACVR2AP27037 513 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 HTR1EP28566 365 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 CRATP43155 626 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 B3GALT5-AS1P59052 145 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 SYPL1Q16563 259 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 PDZK1Q5T2W1 519 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 TMEM211Q6ICI0 200 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 RPTNQ6XPR3 784 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 FRRS1Q6ZNA5 592 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 LRRC74BQ6ZQY2 392 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 MSRB3Q8IXL7 192 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 PM20D2Q8IYS1 436 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 ZNF619Q8N2I2 560 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 ANKFN1Q8N957 763 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 B4GALNT2Q8NHY0 566 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 SFXN2Q96NB2 322 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 RAD21L1Q9H4I0 556 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 SAR1AQ9NR31 198 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 ALKBH4Q9NXW9 302 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 RPH3AQ9Y2J0 694 aaPredicted RBP18.07■□□□□ 0.48
COL9A3-202ENST00000452372 GMEB1Q9Y692 573 aa18.07■□□□□ 0.48
COL9A3-202ENST00000452372 TRBV5-3A0A0A0MS03 114 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 AHRRA9YTQ3 701 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 ANGPT2O15123 496 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 NR2F1P10589 423 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 PTGER4P35408 488 aa18.06■□□□□ 0.48
COL9A3-202ENST00000452372 ADH7P40394 386 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms