RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 NPIPA8P0DM63 369 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 NID1P14543 1247 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 IL7RP16871 459 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 GGT1P19440 569 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 ME2P23368 584 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 PRKAR1BP31321 381 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 KDELR2P33947 212 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 KCNJ2P63252 427 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 KCNJ10P78508 379 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 C17orf67Q0P5P2 114 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 BNIP2Q12982 314 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 LARS2Q15031 903 aaKnown RBP10.58□□□□□ -0.72
SCN9A-204ENST00000452182 INAQ16352 499 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 PRAMEF20Q5VT98 475 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 RNF220Q5VTB9 566 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 SLC6A19Q695T7 634 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 BICRALQ6AI39 1079 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 GALNTL5Q7Z4T8 443 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 SULF2Q8IWU5 870 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 ZFP62Q8NB50 900 aaPredicted RBP10.58□□□□□ -0.72
SCN9A-204ENST00000452182 RASSF5Q8WWW0 418 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 UBL7Q96S82 380 aaPredicted RBP10.58□□□□□ -0.72
SCN9A-204ENST00000452182 THTPAQ9BU02 230 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 CADM1Q9BY67 442 aaKnown RBP10.58□□□□□ -0.72
SCN9A-204ENST00000452182 HES7Q9BYE0 225 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 RTN4RQ9BZR6 473 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 MUC13Q9H3R2 512 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 GORASP2Q9H8Y8 452 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 CACYBPQ9HB71 228 aaKnown RBP10.58□□□□□ -0.72
SCN9A-204ENST00000452182 KLHL1Q9NR64 748 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.58□□□□□ -0.72
SCN9A-204ENST00000452182 ZNF232Q9UNY5 417 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 SLC35A3Q9Y2D2 325 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 M0QX08 132 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 CXCR6O00574 342 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 GSTA4O15217 222 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 PEX1O43933 1283 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 IFNA14P01570 189 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 ELAVL4P26378 380 aaKnown RBP10.58□□□□□ -0.72
SCN9A-204ENST00000452182 AQP1P29972 269 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 PGM1P36871 562 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 CRYBA2P53672 197 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 EEF1A1P68104 462 aaKnown RBP10.58□□□□□ -0.72
SCN9A-204ENST00000452182 FOXO1Q12778 655 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 TRIM25Q14258 630 aaKnown RBP10.58□□□□□ -0.72
SCN9A-204ENST00000452182 CD226Q15762 336 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 ZSCAN26Q16670 478 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 HYAL4Q2M3T9 481 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 LIN52Q52LA3 116 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 EIF3MQ7L2H7 374 aaKnown RBP10.58□□□□□ -0.72
SCN9A-204ENST00000452182 MARCH3Q86UD3 253 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 ARMC8Q8IUR7 673 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 FAM98AQ8NCA5 519 aaKnown RBP10.58□□□□□ -0.72
SCN9A-204ENST00000452182 FAM156AQ8NDB6 213 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 FAM71CQ8NEG0 241 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 OR2M7Q8NG81 312 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 OR52E4Q8NGH9 312 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 WDR60Q8WVS4 1066 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 MCUR1Q96AQ8 359 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 ARMC7Q9H6L4 198 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 GALNT9Q9HCQ5 603 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 SEC14L3Q9UDX4 400 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 MAGEL2Q9UJ55 1249 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 PACSIN3Q9UKS6 424 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 ZNF443Q9Y2A4 671 aaPredicted RBP10.58□□□□□ -0.72
SCN9A-204ENST00000452182 CDHR4A6H8M9 788 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 SCO2O43819 266 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 EIF4E2O60573 245 aaKnown RBP10.57□□□□□ -0.72
SCN9A-204ENST00000452182 GMNNO75496 209 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 C8BP07358 591 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 TCN1P20061 433 aaPredicted RBP10.57□□□□□ -0.72
SCN9A-204ENST00000452182 MSX1P28360 303 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 DNASE1L1P49184 302 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 KLRB1Q12918 225 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 PLEKHN1Q494U1 663 aaPredicted RBP10.57□□□□□ -0.72
SCN9A-204ENST00000452182 ZNF311Q5JNZ3 666 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 TIGD3Q6B0B8 471 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 GLYATQ6IB77 296 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 DHRS4L2Q6PKH6 230 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 PLCZ1Q86YW0 608 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 GRAMD2AQ8IUY3 354 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 ULK2Q8IYT8 1036 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 DUSP19Q8WTR2 217 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 FIG4Q92562 907 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 SLC35B4Q969S0 331 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 TAMM41Q96BW9 452 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 ASB9Q96DX5 294 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 CLPTM1LQ96KA5 538 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 ZNF597Q96LX8 424 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 RNF145Q96MT1 663 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 PINK1Q9BXM7 581 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 RSPO3Q9BXY4 272 aaPredicted RBP10.57□□□□□ -0.72
SCN9A-204ENST00000452182 EVA1AQ9H8M9 152 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 ZFP64Q9NPA5 681 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 EXOSC3Q9NQT5 275 aaKnown RBP10.57□□□□□ -0.72
SCN9A-204ENST00000452182 PPP4R1LQ9P1A2 415 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 EGFL7Q9UHF1 273 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 PRDM4Q9UKN5 801 aa10.57□□□□□ -0.72
SCN9A-204ENST00000452182 BOKQ9UMX3 212 aaPredicted RBP10.57□□□□□ -0.72
SCN9A-204ENST00000452182 SNX13Q9Y5W8 968 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms