RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	SECISBP2	Q96T21	854 aa	Known RBP	7.81	□□□□□ -1.16
HCG18-238	ENST00000449544	NRTN	Q99748	197 aa		7.81	□□□□□ -1.16
HCG18-238	ENST00000449544	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	7.81	□□□□□ -1.16
HCG18-238	ENST00000449544	MMP25	Q9NPA2	562 aa		7.81	□□□□□ -1.16
HCG18-238	ENST00000449544	RBM7	Q9Y580	266 aa	Known RBP	7.81	□□□□□ -1.16
HCG18-238	ENST00000449544	PCDHGB6	Q9Y5F9	930 aa		7.81	□□□□□ -1.16
HCG18-238	ENST00000449544	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	7.8	□□□□□ -1.16	1e-7	■■■□□ 14.6
HCG18-238	ENST00000449544	CSPG4	Q6UVK1	2322 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	SHOX2	O60902	331 aa	Predicted RBP	7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	ATE1	O95260	518 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	WISP1	O95388	367 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	RPS17	P08708	135 aa	Known RBP	7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	TNFRSF8	P28908	595 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	SLC15A1	P46059	708 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	BLVRA	P53004	296 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	KCNJ10	P78508	379 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	CRYZ	Q08257	329 aa	Known RBP	7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	FADD	Q13158	208 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	CLECL1	Q8IZS7	167 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	FBXW8	Q8N3Y1	598 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	SLC25A43	Q8WUT9	341 aa	Predicted RBP	7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	SPRYD4	Q8WW59	207 aa	Predicted RBP	7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	ROPN1L	Q96C74	230 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	RASL10B	Q96S79	203 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	NPAS2	Q99743	824 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	BDH2	Q9BUT1	245 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	SLC19A3	Q9BZV2	496 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	MMADHC	Q9H3L0	296 aa	Predicted RBP	7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	ACSS1	Q9NUB1	689 aa	Predicted RBP	7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	TMPRSS11E	Q9UL52	423 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	LRRK2	Q5S007	2527 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	7.8	□□□□□ -1.16
HCG18-238	ENST00000449544		M0R1B8	84 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	LDLR	P01130	860 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	CD3E	P07766	207 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	HNF1A	P20823	631 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	ARNT	P27540	789 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	HTR1E	P28566	365 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	TRHR	P34981	398 aa	Predicted RBP	7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	NIPAL3	Q6P499	406 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	MDGA2	Q7Z553	956 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	ZNF441	Q8N8Z8	693 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	L3MBTL4	Q8NA19	623 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	OR5D16	Q8NGK9	328 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	OR4C15	Q8NGM1	316 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	OR51V1	Q9H2C8	321 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	ESRP2	Q9H6T0	727 aa	Known RBP	7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	DECR2	Q9NUI1	292 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	TBC1D23	Q9NUY8	699 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	PTGDR2	Q9Y5Y4	395 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	PATJ	Q8NI35	1801 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	XKRX	Q6PP77	449 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	CYHR1	Q6ZMK1	362 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	VN1R4	Q7Z5H5	301 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	SLC43A2	Q8N370	569 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	DTWD1	Q8N5C7	304 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	DNAJA4	Q8WW22	397 aa	Predicted RBP	7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	KLHL15	Q96M94	604 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	CSF3R	Q99062	836 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	HOPX	Q9BPY8	73 aa	Predicted RBP	7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	OCEL1	Q9H607	264 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	PCDHGA9	Q9Y5G4	932 aa	Known RBP	7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	DOCK9	Q9BZ29	2069 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	PKD1L2	Q7Z442	2459 aa		7.8	□□□□□ -1.16
HCG18-238	ENST00000449544	RAD52	P43351	418 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	INPP1	P49441	399 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	PNLIPRP2	P54317	469 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	CDH12	P55289	794 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	SMU1	Q2TAY7	513 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	PEAR1	Q5VY43	1037 aa	Predicted RBP	7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	PPP1R32	Q7Z5V6	425 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	OAF	Q86UD1	273 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	SPPL2C	Q8IUH8	684 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	HMGCLL1	Q8TB92	370 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	AURKB	Q96GD4	344 aa	Predicted RBP	7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	EGLN2	Q96KS0	407 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	B3GNT4	Q9C0J1	378 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	WDR1	O75083	606 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	PNMT	P11086	282 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	COX4I1	P13073	169 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	SDC1	P18827	310 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	IVD	P26440	423 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	CORO7	P57737	925 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	RPS23	P62266	143 aa	Known RBP	7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	SNRPD2	P62316	118 aa	Known RBP	7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	CAMK2D	Q13557	499 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	LRIF1	Q5T3J3	769 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	GLYAT	Q6IB77	296 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	TYW3	Q6IPR3	259 aa	Known RBP	7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	ZNF425	Q6IV72	752 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	FTMT	Q8N4E7	242 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	OR51A7	Q8NH64	312 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	CYGB	Q8WWM9	190 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	DACT3	Q96B18	629 aa	Predicted RBP	7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	TM4SF18	Q96CE8	201 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	CCT8L2	Q96SF2	557 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	RACGAP1	Q9H0H5	632 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	PACSIN3	Q9UKS6	424 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	RCBTB2	O95199	551 aa		7.79	□□□□□ -1.16
HCG18-238	ENST00000449544	CHRM4	P08173	479 aa		7.79	□□□□□ -1.16

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