RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 ANKRD46Q86W74 232 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 OR5D16Q8NGK9 328 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 OR5M1Q8NGP8 315 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 JADE3Q92613 823 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 ZNF524Q96C55 264 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 OR52B2Q96RD2 323 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 HOXD1Q9GZZ0 328 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 HHATLQ9HCP6 504 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 BTNL2Q9UIR0 455 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 MAP1AP78559 2803 aaPredicted RBP12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 PRAMEF27A3QJZ7 478 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 C7orf72A4D263 438 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 SHISA8B8ZZ34 492 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 E9PBE3 544 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 DVL2O14641 736 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 EFNA2O43921 213 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 FCMRO60667 390 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 TNFRSF21O75509 655 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 GUSBP08236 651 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 KITP10721 976 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 MATN1P21941 496 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 UQCRC2P22695 453 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 SSTR2P30874 369 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 ATP12AP54707 1039 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 CLDN20P56880 219 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 RCAN2Q14206 197 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 FAM174BQ3ZCQ3 159 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 SAXO2Q658L1 398 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 BHLHB9Q6PI77 547 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 EPGNQ6UW88 154 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 GDF7Q7Z4P5 450 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 MISPQ8IVT2 679 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 GTPBP8Q8N3Z3 284 aaPredicted RBP12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 GATSQ8NAP1 163 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 POC1BQ8TC44 478 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 PIWIL2Q8TC59 973 aaKnown RBP12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 NEURL3Q96EH8 262 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 C7orf26Q96N11 449 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 PIGQQ9BRB3 760 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 VIPAS39Q9H9C1 493 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 ICAM5Q9UMF0 924 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 L3MBTL1Q9Y468 752 aa12.69□□□□□ -0.38
RTFDC1-204ENST00000449062 ANKRD17O75179 2603 aaKnown RBP12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 A0A087WZY1 265 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 NPIPA5A0A0B4J1W7 369 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 DUXAA6NLW8 204 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 C9JVG2 144 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 NPIPA7E9PJI5 369 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 H0Y3Z8 333 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 DNAJA2O60884 412 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 CPSF4O95639 269 aaKnown RBP12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 LINGO3P0C6S8 592 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 NPIPA8P0DM63 369 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 BMP5P22003 454 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 S100A3P33764 101 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 AGFG1P52594 562 aaKnown RBP12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 NME5P56597 212 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 ARHGAP11BQ3KRB8 267 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 CBLN3Q6UW01 205 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 MTERF4Q7Z6M4 381 aaKnown RBP12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 GGNQ86UU5 652 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 VPS37AQ8NEZ2 397 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 OR4A15Q8NGL6 344 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 ADGRG7Q96K78 797 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 ZFP3Q96NJ6 502 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 TM9SF2Q99805 663 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 NMUR2Q9GZQ4 415 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 SAP130Q9H0E3 1048 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 SLCO1B3Q9NPD5 702 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 SDR39U1Q9NRG7 319 aaPredicted RBP12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 MED17Q9NVC6 651 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 PCDHGB4Q9UN71 923 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 AP4B1Q9Y6B7 739 aa12.68□□□□□ -0.38
RTFDC1-204ENST00000449062 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 RNF103-CHMP3A0A140T963 221 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 ETV2O00321 342 aaPredicted RBP12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 SCDO00767 359 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 ADAMDEC1O15204 470 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 TNFSF13O75888 250 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 PGRP06401 933 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 TMIGD3P0DMS9 266 aaPredicted RBP12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 POU3F2P20265 443 aaPredicted RBP12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 OPRM1P35372 400 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 ZNF117Q03924 483 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 FUT5Q11128 374 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 ZNF141Q15928 474 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 CTU2Q2VPK5 515 aaKnown RBP12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 PLPPR5Q32ZL2 321 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 PDCD4Q53EL6 469 aaKnown RBP12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 RAET1LQ5VY80 246 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 OLIG3Q7RTU3 272 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 HDXQ7Z353 690 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 METTL25Q8N6Q8 603 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 GLB1L3Q8NCI6 653 aaPredicted RBP12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 B4GALNT2Q8NHY0 566 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 GPR119Q8TDV5 335 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 FIG4Q92562 907 aa12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 RNASE6Q93091 150 aaKnown RBP12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 INTS12Q96CB8 462 aaKnown RBP12.67□□□□□ -0.38
RTFDC1-204ENST00000449062 ZG16BQ96DA0 208 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms