RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 CNOT11Q9UKZ1 510 aaKnown RBP12.88□□□□□ -0.35
SHMT2-203ENST00000449049 SLC35A3Q9Y2D2 325 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 PRAMEF25A6NGN4 478 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 WDPCPO95876 746 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 HOXB6P17509 224 aaKnown RBP12.87□□□□□ -0.35
SHMT2-203ENST00000449049 SLC7A1P30825 629 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 CD96P40200 585 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 CASRP41180 1078 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 PTGDSP41222 190 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 GAS1P54826 345 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 CD226Q15762 336 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 NRF1Q16656 503 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 FAM98BQ52LJ0 330 aaKnown RBP12.87□□□□□ -0.35
SHMT2-203ENST00000449049 IGFL2Q6UWQ7 119 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 FKBP9P1Q75LS8 142 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 KDF1Q8NAX2 398 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-203ENST00000449049 PAPD5Q8NDF8 572 aaKnown RBP12.87□□□□□ -0.35
SHMT2-203ENST00000449049 GEMIN6Q8WXD5 167 aaKnown RBP12.87□□□□□ -0.35
SHMT2-203ENST00000449049 SLC35B4Q969S0 331 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 SEPHS2Q99611 448 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 UTP23Q9BRU9 249 aaKnown RBP12.87□□□□□ -0.35
SHMT2-203ENST00000449049 EVA1AQ9H8M9 152 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 RLIMQ9NVW2 624 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 ANKRD10Q9NXR5 420 aa12.87□□□□□ -0.35
SHMT2-203ENST00000449049 SPTBN2O15020 2390 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 CACNA1AO00555 2505 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 BCAS1O75363 584 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-203ENST00000449049 RAP2AP10114 183 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 ENDOUP21128 410 aaKnown RBP12.86□□□□□ -0.35
SHMT2-203ENST00000449049 CASP3P42574 277 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 CLK3P49761 638 aaKnown RBP12.86□□□□□ -0.35
SHMT2-203ENST00000449049 RNF144AP50876 292 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-203ENST00000449049 SNTA1Q13424 505 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 MARCH3Q86UD3 253 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 SMAD5Q99717 465 aaKnown RBP12.86□□□□□ -0.35
SHMT2-203ENST00000449049 KLHL28Q9NXS3 571 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 DNAJB12Q9NXW2 375 aaKnown RBP12.86□□□□□ -0.35
SHMT2-203ENST00000449049 CNIH4Q9P003 139 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 SLC13A4Q9UKG4 626 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 C15orf41Q9Y2V0 281 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 SH3GLB1Q9Y371 365 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 H3BNH8 94 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 NDUFB5O43674 189 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 FKBP6O75344 327 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 ANGPTL1O95841 491 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 CSTAP01040 98 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 CCL3P10147 92 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 TNFRSF1BP20333 461 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 MAGEA2P43356 314 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 OC90Q02509 493 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-203ENST00000449049 KCNC4Q03721 635 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 CHRNB3Q05901 458 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 SLC22A10Q63ZE4 541 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 BICRALQ6AI39 1079 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 ZFP1Q6P2D0 407 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 AAGABQ6PD74 315 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 BORAQ6PGQ7 559 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 MISPQ8IVT2 679 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 OR4D11Q8NGI4 311 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 PHOSPHO1Q8TCT1 267 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 PYDC1Q8WXC3 89 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 CNOT9Q92600 299 aaKnown RBP12.86□□□□□ -0.35
SHMT2-203ENST00000449049 HAS2Q92819 552 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 C7orf34Q96L11 122 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 WFDC6Q9BQY6 131 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 OSBPL11Q9BXB4 747 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 ANGPTL4Q9BY76 406 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 METTL7AQ9H8H3 244 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 IL1RAPQ9NPH3 570 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 ARMC1Q9NVT9 282 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 KLRF1Q9NZS2 232 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 LRFN1Q9P244 771 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 AURKCQ9UQB9 309 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 SLC9A8Q9Y2E8 581 aa12.86□□□□□ -0.35
SHMT2-203ENST00000449049 PCDHGA9Q9Y5G4 932 aaKnown RBP12.86□□□□□ -0.35
SHMT2-203ENST00000449049 OR5H15A6NDH6 313 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 M0R3H8 397 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 SCO2O43819 266 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 NEURL1O76050 574 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 UBL4AP11441 157 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 OR1E2P47887 323 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 SLC30A6Q6NXT4 461 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 MDGA2Q7Z553 956 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 TSEN54Q7Z6J9 526 aaKnown RBP12.85□□□□□ -0.35
SHMT2-203ENST00000449049 CARM1Q86X55 608 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 LACC1Q8IV20 430 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 GATSQ8NAP1 163 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 STMN2Q93045 179 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 FRMD6Q96NE9 622 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 SIGLEC12Q96PQ1 595 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 GALNT9Q9HCQ5 603 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 S100A14Q9HCY8 104 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 EXOSC3Q9NQT5 275 aaKnown RBP12.85□□□□□ -0.35
SHMT2-203ENST00000449049 PLA2G3Q9NZ20 509 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 AP4S1Q9Y587 144 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 H3BNX3 289 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 ZNF264O43296 627 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 KRT36O76013 467 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 F10P00742 488 aa12.85□□□□□ -0.35
SHMT2-203ENST00000449049 VLDLRP98155 873 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms