RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 CIARTQ8N365 385 aaPredicted RBP25.33■■□□□ 1.65
CBX4-202ENST00000448310 COX18Q8N8Q8 333 aa25.33■■□□□ 1.65
CBX4-202ENST00000448310 OR6Y1Q8NGX8 325 aa25.33■■□□□ 1.65
CBX4-202ENST00000448310 OR6K3Q8NGY3 331 aa25.33■■□□□ 1.65
CBX4-202ENST00000448310 PERPQ96FX8 193 aa25.33■■□□□ 1.65
CBX4-202ENST00000448310 GMPPAQ96IJ6 420 aaPredicted RBP25.33■■□□□ 1.65
CBX4-202ENST00000448310 PLSCR4Q9NRQ2 329 aa25.33■■□□□ 1.65
CBX4-202ENST00000448310 MID2Q9UJV3 735 aa25.33■■□□□ 1.65
CBX4-202ENST00000448310 TRIM13O60858 407 aa25.32■■□□□ 1.64
CBX4-202ENST00000448310 SS18L1O75177 396 aaPredicted RBP25.32■■□□□ 1.64
CBX4-202ENST00000448310 CHEK2O96017 543 aa25.32■■□□□ 1.64
CBX4-202ENST00000448310 BCKDHAP12694 445 aa25.32■■□□□ 1.64
CBX4-202ENST00000448310 HPGDP15428 266 aa25.32■■□□□ 1.64
CBX4-202ENST00000448310 FPR1P21462 350 aa25.32■■□□□ 1.64
CBX4-202ENST00000448310 ZNF41P51814 821 aaPredicted RBP25.32■■□□□ 1.64
CBX4-202ENST00000448310 CD226Q15762 336 aa25.32■■□□□ 1.64
CBX4-202ENST00000448310 POC1BQ8TC44 478 aa25.32■■□□□ 1.64
CBX4-202ENST00000448310 ZBTB8AQ96BR9 441 aa25.32■■□□□ 1.64
CBX4-202ENST00000448310 FAM120BQ96EK7 910 aaKnown RBP25.32■■□□□ 1.64
CBX4-202ENST00000448310 PPCSQ9HAB8 311 aa25.32■■□□□ 1.64
CBX4-202ENST00000448310 SIRT3Q9NTG7 399 aaPredicted RBP25.32■■□□□ 1.64
CBX4-202ENST00000448310 MCTS1Q9ULC4 181 aaKnown RBP25.32■■□□□ 1.64
CBX4-202ENST00000448310 FN1P02751 2386 aaKnown RBP25.32■■□□□ 1.64
CBX4-202ENST00000448310 A0A0J9YW62 118 aa25.31■■□□□ 1.64
CBX4-202ENST00000448310 SCDO00767 359 aa25.31■■□□□ 1.64
CBX4-202ENST00000448310 IL11P20809 199 aa25.31■■□□□ 1.64
CBX4-202ENST00000448310 RNF144AP50876 292 aaPredicted RBP25.31■■□□□ 1.64
CBX4-202ENST00000448310 RAC1P63000 192 aa25.31■■□□□ 1.64
CBX4-202ENST00000448310 CPTPQ5TA50 214 aa25.31■■□□□ 1.64
CBX4-202ENST00000448310 OR2V1Q8NHB1 315 aa25.31■■□□□ 1.64
CBX4-202ENST00000448310 TWIST2Q8WVJ9 160 aa25.31■■□□□ 1.64
CBX4-202ENST00000448310 CAVIN3Q969G5 261 aa25.31■■□□□ 1.64
CBX4-202ENST00000448310 CHMP6Q96FZ7 201 aa25.31■■□□□ 1.64
CBX4-202ENST00000448310 Q96MF0 132 aa25.31■■□□□ 1.64
CBX4-202ENST00000448310 TRMOQ9BU70 441 aa25.31■■□□□ 1.64
CBX4-202ENST00000448310 UBQLN4Q9NRR5 601 aa25.31■■□□□ 1.64
CBX4-202ENST00000448310 ZCCHC3Q9NUD5 404 aaKnown RBP25.31■■□□□ 1.64
CBX4-202ENST00000448310 TMED5Q9Y3A6 229 aa25.31■■□□□ 1.64
CBX4-202ENST00000448310 ABCA2Q9BZC7 2435 aa25.31■■□□□ 1.64
CBX4-202ENST00000448310 C7orf72A4D263 438 aa25.3■■□□□ 1.64
CBX4-202ENST00000448310 H7C1Q1 480 aa25.3■■□□□ 1.64
CBX4-202ENST00000448310 PIP5K1BO14986 540 aa25.3■■□□□ 1.64
CBX4-202ENST00000448310 ADAMDEC1O15204 470 aa25.3■■□□□ 1.64
CBX4-202ENST00000448310 SYNGR4O95473 234 aa25.3■■□□□ 1.64
CBX4-202ENST00000448310 ASMTP46597 345 aa25.3■■□□□ 1.64
CBX4-202ENST00000448310 LASP1Q14847 261 aaKnown RBP25.3■■□□□ 1.64
CBX4-202ENST00000448310 EXOSC6Q5RKV6 272 aaKnown RBP25.3■■□□□ 1.64
CBX4-202ENST00000448310 STAC2Q6ZMT1 411 aa25.3■■□□□ 1.64
CBX4-202ENST00000448310 YTHDF3Q7Z739 585 aaKnown RBP25.3■■□□□ 1.64
CBX4-202ENST00000448310 OR7A2PQ8NGA2 310 aa25.3■■□□□ 1.64
CBX4-202ENST00000448310 B4GALNT2Q8NHY0 566 aa25.3■■□□□ 1.64
CBX4-202ENST00000448310 PPP1R14CQ8TAE6 165 aa25.3■■□□□ 1.64
CBX4-202ENST00000448310 AGR3Q8TD06 166 aa25.3■■□□□ 1.64
CBX4-202ENST00000448310 ACTRT2Q8TDY3 377 aa25.3■■□□□ 1.64
CBX4-202ENST00000448310 CDS1Q92903 461 aa25.3■■□□□ 1.64
CBX4-202ENST00000448310 MECRQ9BV79 373 aa25.3■■□□□ 1.64
CBX4-202ENST00000448310 TLN2Q9Y4G6 2542 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP25.29■■□□□ 1.64
CBX4-202ENST00000448310 HMGN2P05204 90 aaKnown RBP25.29■■□□□ 1.64
CBX4-202ENST00000448310 ALDH3A1P30838 453 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 SERPINB4P48594 390 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 PRIM2P49643 509 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 POU6F2P78424 691 aaPredicted RBP25.29■■□□□ 1.64
CBX4-202ENST00000448310 UGT3A2Q3SY77 523 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 HBMQ6B0K9 141 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 ZCCHC12Q6PEW1 402 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 C20orf204Q6ZNR8 217 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 ESPNLQ6ZVH7 1005 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 EIF1ADQ8N9N8 165 aaKnown RBP25.29■■□□□ 1.64
CBX4-202ENST00000448310 MTERF3Q96E29 417 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 BTBD2Q9BX70 525 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 C12orf49Q9H741 205 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 HHATLQ9HCP6 504 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 PAQR5Q9NXK6 330 aaPredicted RBP25.29■■□□□ 1.64
CBX4-202ENST00000448310 GIN1Q9NXP7 522 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 TRAF6Q9Y4K3 522 aa25.29■■□□□ 1.64
CBX4-202ENST00000448310 FREM1Q5H8C1 2179 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 NPIPA5A0A0B4J1W7 369 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 TLDC2A0PJX2 215 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 NPIPA7E9PJI5 369 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 KLF4O43474 513 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 LY6G6DO95868 133 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 HEXAP06865 529 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 NPIPA8P0DM63 369 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 SHC1P29353 583 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 HPCAL1P37235 193 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 ARL13AQ5H913 290 aaPredicted RBP25.28■■□□□ 1.64
CBX4-202ENST00000448310 R3HCC1LQ7Z5L2 792 aaKnown RBP25.28■■□□□ 1.64
CBX4-202ENST00000448310 MISPQ8IVT2 679 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 OR2W6PQ8NHA6 318 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 NUDT8Q8WV74 236 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 APOPT1Q96IL0 206 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 COX4I2Q96KJ9 171 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 ATP6V1HQ9UI12 483 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 SNX8Q9Y5X2 465 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 USF3Q68DE3 2245 aa25.28■■□□□ 1.64
CBX4-202ENST00000448310 A0A1W2PQD3 144 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 SMAD7O15105 426 aaKnown RBP25.27■■□□□ 1.64
CBX4-202ENST00000448310 SCAMP2O15127 329 aaKnown RBP25.27■■□□□ 1.64
CBX4-202ENST00000448310 OIP5O43482 229 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 292.5 ms