RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 DUSP19Q8WTR2 217 aa12.8□□□□□ -0.36
CTSS-202ENST00000448301 JSRP1Q96MG2 331 aaPredicted RBP12.8□□□□□ -0.36
CTSS-202ENST00000448301 ZNF703Q9H7S9 590 aaPredicted RBP12.8□□□□□ -0.36
CTSS-202ENST00000448301 CACYBPQ9HB71 228 aaKnown RBP12.8□□□□□ -0.36
CTSS-202ENST00000448301 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.8□□□□□ -0.36
CTSS-202ENST00000448301 TAS2R1Q9NYW7 299 aa12.8□□□□□ -0.36
CTSS-202ENST00000448301 ADA2Q9NZK5 511 aa12.8□□□□□ -0.36
CTSS-202ENST00000448301 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.8□□□□□ -0.36
CTSS-202ENST00000448301 B4GALT7Q9UBV7 327 aa12.8□□□□□ -0.36
CTSS-202ENST00000448301 USP22Q9UPT9 525 aa12.8□□□□□ -0.36
CTSS-202ENST00000448301 SLC35A3Q9Y2D2 325 aa12.8□□□□□ -0.36
CTSS-202ENST00000448301 C15orf41Q9Y2V0 281 aa12.8□□□□□ -0.36
CTSS-202ENST00000448301 IFT52Q9Y366 437 aa12.8□□□□□ -0.36
CTSS-202ENST00000448301 GPC6Q9Y625 555 aaPredicted RBP12.8□□□□□ -0.36
CTSS-202ENST00000448301 SMG1Q96Q15 3661 aaKnown RBP12.8□□□□□ -0.36
CTSS-202ENST00000448301 PCNX3Q9H6A9 2034 aa12.8□□□□□ -0.36
CTSS-202ENST00000448301 PDE9AO76083 593 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 PABPC4LP0CB38 370 aaKnown RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 NID1P14543 1247 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 IL7RP16871 459 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 ZNF24P17028 368 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 MSX1P28360 303 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 RFC3P40938 356 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 SPATS1Q496A3 300 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 LIN52Q52LA3 116 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 SAMD4BQ5PRF9 694 aaKnown RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 BNC2Q6ZN30 1099 aaPredicted RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 CCDC80Q76M96 950 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 EIF3MQ7L2H7 374 aaKnown RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 PATL1Q86TB9 770 aaKnown RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 CMIPQ8IY22 773 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 ARHGAP24Q8N264 748 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 CISD2Q8N5K1 135 aaKnown RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 FADS6Q8N9I5 356 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 GATSQ8NAP1 163 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 FAM71CQ8NEG0 241 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 SNRNP40Q96DI7 357 aaKnown RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 DTNBP1Q96EV8 351 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 ZNF607Q96SK3 696 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 CDRT15Q96T59 188 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 SPATA5L1Q9BVQ7 753 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 UBQLN3Q9H347 655 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 QPCTLQ9NXS2 382 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 ZNF443Q9Y2A4 671 aaPredicted RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 NTNG1Q9Y2I2 539 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 HRH3Q9Y5N1 445 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 COL6A6A6NMZ7 2263 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 PRORSD1PA6NEY8 169 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 TTLL8A6PVC2 850 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 C17orf51A8MQB3 221 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 B4DXG7 233 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 ZNF264O43296 627 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 SUV39H1O43463 412 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 EIF4E2O60573 245 aaKnown RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 GCM2O75603 506 aaPredicted RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 SERPINB7O75635 380 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 CBR3O75828 277 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 ATP5HO75947 161 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 CSTAP01040 98 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 UBL4AP11441 157 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 HSD17B1P14061 328 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 AQP1P29972 269 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 PGM1P36871 562 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 PPIAP62937 165 aaKnown RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 KCNJ10P78508 379 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 ALDH6A1Q02252 535 aaKnown RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 ZNF117Q03924 483 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 LARS2Q15031 903 aaKnown RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 ZSWIM7Q19AV6 140 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 DNAL1Q4LDG9 190 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 ZNF311Q5JNZ3 666 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 RNFT1Q5M7Z0 435 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 RNF220Q5VTB9 566 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 ZNF324BQ6AW86 544 aaPredicted RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 HMGN2P46Q86SG4 172 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 VRK2Q86Y07 508 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 FAM109AQ8N4B1 249 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 TMEM251Q8N6I4 163 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 TNIP2Q8NFZ5 429 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 OR2M3Q8NG83 312 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 OR4K17Q8NGC6 315 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 SLC7A6OSQ96CW6 309 aaPredicted RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 GNRHR2Q96P88 292 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 BARD1Q99728 777 aaKnown RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 KCTD14Q9BQ13 255 aaPredicted RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 ZDHHC11Q9H8X9 412 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 GMPR2Q9P2T1 348 aaKnown RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 CD300AQ9UGN4 299 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 PRPF19Q9UMS4 504 aaKnown RBP12.79□□□□□ -0.36
CTSS-202ENST00000448301 ZNF232Q9UNY5 417 aa12.79□□□□□ -0.36
CTSS-202ENST00000448301 HEATR5AQ86XA9 2040 aa12.78□□□□□ -0.36
CTSS-202ENST00000448301 FREM3P0C091 2139 aa12.78□□□□□ -0.36
CTSS-202ENST00000448301 FAM166BA8MTA8 275 aa12.78□□□□□ -0.36
CTSS-202ENST00000448301 GTPBP1O00178 669 aaKnown RBP12.78□□□□□ -0.36
CTSS-202ENST00000448301 EBAG9O00559 213 aa12.78□□□□□ -0.36
CTSS-202ENST00000448301 TFECO14948 347 aaPredicted RBP12.78□□□□□ -0.36
CTSS-202ENST00000448301 RFPL3SP0C7P2 107 aa12.78□□□□□ -0.36
CTSS-202ENST00000448301 GDF1P27539 372 aa12.78□□□□□ -0.36
CTSS-202ENST00000448301 HTR1EP28566 365 aa12.78□□□□□ -0.36
CTSS-202ENST00000448301 PRKAR1BP31321 381 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms