RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PLEKHA3Q9HB20 300 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 KLHL42Q9P2K6 505 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 NAALAD2Q9Y3Q0 740 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 MYH15Q9Y2K3 1946 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 OR6C6A6NF89 314 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 CRTAPO75718 401 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-204ENST00000448183 SNAPINO95295 136 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 SERPINA5P05154 406 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 HNRNPA1P09651 372 aaKnown RBP eCLIP7.33□□□□□ -1.24
NEDD9-204ENST00000448183 NUDT7P0C024 238 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 TAS2R20P59543 309 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 CXADRP78310 365 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 GPR50Q13585 617 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 FGL2Q14314 439 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 GRM7Q14831 915 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 SMN1Q16637 294 aaKnown RBP7.33□□□□□ -1.24
NEDD9-204ENST00000448183 RTP2Q5QGT7 225 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 SLC6A19Q695T7 634 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 TPRA1Q86W33 373 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 MFSD6LQ8IWD5 586 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF619Q8N2I2 560 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 DNAJC5GQ8N7S2 189 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 TMEM163Q8TC26 289 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 NEIL2Q969S2 332 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 CWH43Q9H720 699 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 TMEM100Q9NV29 134 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 B3GALT1Q9Y5Z6 326 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 KCPQ6ZWJ8 1503 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 PRRC2BQ5JSZ5 2229 aaKnown RBP7.33□□□□□ -1.24
NEDD9-204ENST00000448183 ROBO1Q9Y6N7 1651 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 FAM230AA0A1W2PPH8 454 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 NPIPB15A6NHN6 443 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-204ENST00000448183 AQP9O43315 295 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 HTR3BO95264 441 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 ACPPP15309 386 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 MMP12P39900 470 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 CASP3P42574 277 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 GIPRP48546 466 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 IL13RA1P78552 427 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 LCTLQ6UWM7 567 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 MAMDC4Q6UXC1 1216 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 UNQ6126/PRO20091Q6UXV3 157 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 SPRED1Q7Z699 444 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 SCD5Q86SK9 330 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 LRRC56Q8IYG6 542 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-204ENST00000448183 CMTM1Q8IZ96 169 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 CHST14Q8NCH0 376 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 RCBTB1Q8NDN9 531 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 SDR9C7Q8NEX9 313 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 OR51T1Q8NGJ9 327 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 ADAMTS16Q8TE57 1224 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 RPL3LQ92901 407 aaKnown RBP7.33□□□□□ -1.24
NEDD9-204ENST00000448183 ZBTB8AQ96BR9 441 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 SERINC2Q96SA4 455 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 GMLQ99445 158 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 ZFYVE21Q9BQ24 234 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 C19orf12Q9NSK7 152 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 B4GALT7Q9UBV7 327 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 ATG4BQ9Y4P1 393 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 CIB4A0PJX0 185 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 WASH4PA8MWX3 477 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 SRPX2O60687 465 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 SEC14L2O76054 403 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 ALDOCP09972 364 aaKnown RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 ACP2P11117 423 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 RPS2P15880 293 aaKnown RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF43P17038 809 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 GABRB3P28472 473 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 CD6P30203 668 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 SSTR2P30874 369 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 FXYD4P59646 89 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 EIF2B1Q14232 305 aaKnown RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF695Q8IW36 515 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 OR5AR1Q8NGP9 310 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 OR13F1Q8NGS4 319 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 OR5H6Q8NGV6 325 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 OR56B4Q8NH76 319 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 BPIFA2Q96DR5 249 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 HINT2Q9BX68 163 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 OR52D1Q9H346 318 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 USP36Q9P275 1121 aaKnown RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 GGT3PA6NGU5 568 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 A6NIN4 97 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 DUX1O43812 170 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 OR2T1O43869 369 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 MT-ND4P03905 459 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 TP53P04637 393 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF140P52738 457 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-204ENST00000448183 GLO1Q04760 184 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 SERTAD2Q14140 314 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 PEA15Q15121 130 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 IRF4Q15306 451 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 PGGHGQ32M88 737 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 TCTE1Q5JU00 501 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 AGAP7PQ5VUJ5 663 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 LCN10Q6JVE6 187 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 PODNL1Q6PEZ8 512 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 UEVLDQ8IX04 471 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 IL17RCQ8NAC3 791 aa7.32□□□□□ -1.24
NEDD9-204ENST00000448183 OR9A2Q8NGT5 310 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms