RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 SDR39U1Q9NRG7 319 aaPredicted RBP8.04□□□□□ -1.12
PTPN3-204ENST00000446349 SGK494L7N484 410 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF264O43296 627 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 CXCL10P02778 98 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 RPS17P08708 135 aaKnown RBP8.04□□□□□ -1.12
PTPN3-204ENST00000446349 MAGP20916 626 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 GPR3P46089 330 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 ATP1B3P54709 279 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 S100A10P60903 97 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 TMPRSS12Q86WS5 348 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 KRTCAP2Q8N6L1 136 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 CNEP1R1Q8N9A8 125 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 C7orf50Q9BRJ6 194 aaKnown RBP8.04□□□□□ -1.12
PTPN3-204ENST00000446349 EBF2Q9HAK2 575 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 ENAMQ9NRM1 1142 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 MOKQ9UQ07 419 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 UBE2J1Q9Y385 318 aaPredicted RBP8.04□□□□□ -1.12
PTPN3-204ENST00000446349 TTC3P53804 2025 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 ITGBL1O95965 494 aaPredicted RBP8.04□□□□□ -1.12
PTPN3-204ENST00000446349 CELP19835 753 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 CBLP22681 906 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 PRKACBP22694 351 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 ARL3P36405 182 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 ERVPABLB-1P60509 514 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 EEF1A2Q05639 463 aaKnown RBP8.04□□□□□ -1.12
PTPN3-204ENST00000446349 BNIP3Q12983 259 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 RGNQ15493 299 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 NKAPLQ5M9Q1 402 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 C6orf141Q5SZD1 244 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 LHFPL3Q86UP9 236 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 TCEAL4Q96EI5 215 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 TREX1Q9NSU2 369 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 MED17Q9NVC6 651 aa8.04□□□□□ -1.12
PTPN3-204ENST00000446349 FARSAQ9Y285 508 aaKnown RBP8.04□□□□□ -1.12
PTPN3-204ENST00000446349 TP53P04637 393 aaPredicted RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 GRK1Q15835 563 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF517Q6ZMY9 492 aaPredicted RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 ACOT11Q8WXI4 607 aaPredicted RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 BORCS7Q96B45 105 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 NAP1L6A6NFF2 107 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 TMEM225BP0DP42 221 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 DCTP40126 519 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 ARSDP51689 593 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 MAZP56270 477 aaKnown RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 LPAL2Q16609 132 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 FAM160A2Q8N612 972 aaPredicted RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 MAFAQ8NHW3 353 aaPredicted RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 PCDHGA3Q9Y5H0 932 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 A0A0A6YYC8 382 aaPredicted RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 I3L1I5 382 aaPredicted RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 ARNTLO00327 626 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 GMPRP36959 345 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 RBM39Q14498 530 aaKnown RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 MICAQ29983 383 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF181Q2M3W8 571 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 AWAT2Q6E213 333 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 TRIM46Q7Z4K8 759 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 OR9I1Q8NGQ6 314 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 GPR83Q9NYM4 423 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 PLEK2Q9NYT0 353 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 EGFP01133 1207 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 UGT2B7P16662 529 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 AZGP1P25311 298 aaKnown RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 SFTPDP35247 375 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 APOFQ13790 326 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 KEAP1Q14145 624 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 HACD4Q5VWC8 232 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 NOXA1Q86UR1 476 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 TMEFF1Q8IYR6 380 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 NEIL2Q969S2 332 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 GAL3ST1Q99999 423 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 HAPLN2Q9GZV7 340 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 KLF13Q9Y2Y9 288 aaPredicted RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 DDX60LQ5H9U9 1706 aaKnown RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 COL18A1P39060 1754 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 NUP205Q92621 2012 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 H3BML4 177 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 MKRN2OSH3BPM6 223 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 DDAH2O95865 285 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 CD68P34810 354 aaPredicted RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 OR1E2P47887 323 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 CYB561P49447 251 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 DPTQ07507 201 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 TMED4Q7Z7H5 227 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 LRR1Q96L50 414 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 PKP2Q99959 881 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 WDR83Q9BRX9 315 aaKnown RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 C1QTNF2Q9BXJ5 285 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 SMOXQ9NWM0 555 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 TRA2AQ13595 282 aaKnown RBP eCLIP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 MEF2DQ14814 521 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 NLRP8Q86W28 1048 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 OR2A12Q8NGT7 310 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 TIMD4Q96H15 378 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 LCORQ96JN0 433 aaPredicted RBP8.03□□□□□ -1.12
PTPN3-204ENST00000446349 OR4K3Q96R72 315 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 CCDC106Q9BWC9 280 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 ULBP2Q9BZM5 246 aa8.03□□□□□ -1.12
PTPN3-204ENST00000446349 CDC14CA4D256 554 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms