RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 SDHAF3Q9NRP4 125 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 THAP1Q9NVV9 213 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 DNAJB12Q9NXW2 375 aaKnown RBP9.79□□□□□ -0.84
SF3A1-203ENST00000444440 ASIC5Q9NY37 505 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 HAO1Q9UJM8 370 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 MRTO4Q9UKD2 239 aaKnown RBP9.79□□□□□ -0.84
SF3A1-203ENST00000444440 MAP1AP78559 2803 aaPredicted RBP9.78□□□□□ -0.84
SF3A1-203ENST00000444440 DSCAMO60469 2012 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 ITPR3Q14573 2671 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 CENPVL1A0A0U1RR11 272 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 SLC22A20A6NK97 555 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 A6NNC1 897 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 NDUFB5O43674 189 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 EFNA2O43921 213 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 AQP8O94778 261 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 ALDOCP09972 364 aaKnown RBP9.78□□□□□ -0.84
SF3A1-203ENST00000444440 SHC1P29353 583 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 DNAJA1P31689 397 aaKnown RBP9.78□□□□□ -0.84
SF3A1-203ENST00000444440 KIR2DL2P43627 348 aaPredicted RBP9.78□□□□□ -0.84
SF3A1-203ENST00000444440 SLC6A8P48029 635 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 PRIM2P49643 509 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 CASP9P55211 416 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 CLDN8P56748 225 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 POU6F2P78424 691 aaPredicted RBP9.78□□□□□ -0.84
SF3A1-203ENST00000444440 ZNF117Q03924 483 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 BST1Q10588 318 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 PON3Q15166 354 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 GUSBP1Q15486 140 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 CTU2Q2VPK5 515 aaKnown RBP9.78□□□□□ -0.84
SF3A1-203ENST00000444440 PGS1Q32NB8 556 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 PLPPR5Q32ZL2 321 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 ZCCHC12Q6PEW1 402 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 CBLN3Q6UW01 205 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 BTLAQ7Z6A9 289 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 RAB3IL1Q8TBN0 382 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 MGARPQ8TDB4 240 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 STARD4Q96DR4 205 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 ADGRG7Q96K78 797 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 TEX37Q96LM6 180 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 ZFP3Q96NJ6 502 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 OR7D2Q96RA2 312 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 STACQ99469 402 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 SFXN3Q9BWM7 321 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 RBM24Q9BX46 236 aaKnown RBP9.78□□□□□ -0.84
SF3A1-203ENST00000444440 ACTRT3Q9BYD9 372 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 NUF2Q9BZD4 464 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 BHLHE41Q9C0J9 482 aaPredicted RBP9.78□□□□□ -0.84
SF3A1-203ENST00000444440 OPN3Q9H1Y3 402 aaPredicted RBP9.78□□□□□ -0.84
SF3A1-203ENST00000444440 PTGES2Q9H7Z7 377 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 DUSP22Q9NRW4 184 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 RASSF1Q9NS23 344 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 MED17Q9NVC6 651 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 ATAD3AQ9NVI7 634 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 NOP53Q9NZM5 478 aaKnown RBP9.78□□□□□ -0.84
SF3A1-203ENST00000444440 KCNE5Q9UJ90 142 aa9.78□□□□□ -0.84
SF3A1-203ENST00000444440 A8MXE2 369 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 C9JVG2 144 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 NPIPB9F8W1W9 429 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 SLCO1B7G3V0H7 640 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 SDHDO14521 159 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 SIAH2O43255 324 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 PRPS1L1P21108 318 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 CCKARP32238 428 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 SOAT1P35610 550 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 CLK3P49761 638 aaKnown RBP9.77□□□□□ -0.85
SF3A1-203ENST00000444440 IST1P53990 364 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 FAM27E3Q08E93 113 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 FUT5Q11128 374 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 TOMM34Q15785 309 aaPredicted RBP9.77□□□□□ -0.85
SF3A1-203ENST00000444440 LSM12Q3MHD2 195 aaKnown RBP9.77□□□□□ -0.85
SF3A1-203ENST00000444440 GLYR1Q49A26 553 aaPredicted RBP9.77□□□□□ -0.85
SF3A1-203ENST00000444440 DCST2Q5T1A1 773 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 ZNF474Q6S9Z5 364 aaPredicted RBP9.77□□□□□ -0.85
SF3A1-203ENST00000444440 P4HA3Q7Z4N8 544 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 ANKRD46Q86W74 232 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 CDC20BQ86Y33 519 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 METTL25Q8N6Q8 603 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 SFXN5Q8TD22 340 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 FAM222BQ8WU58 562 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 DTNBP1Q96EV8 351 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 CHMP6Q96FZ7 201 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 RNF145Q96MT1 663 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 PIGQQ9BRB3 760 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 POLDIP3Q9BY77 421 aaKnown RBP9.77□□□□□ -0.85
SF3A1-203ENST00000444440 CLEC4MQ9H2X3 399 aaPredicted RBP9.77□□□□□ -0.85
SF3A1-203ENST00000444440 TMEM185BQ9H7F4 350 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 MANSC1Q9H8J5 431 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 VIPAS39Q9H9C1 493 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 RNF122Q9H9V4 155 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 UBQLN4Q9NRR5 601 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 ZFHX3Q15911 3703 aa9.77□□□□□ -0.85
SF3A1-203ENST00000444440 A0A0J9YW62 118 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 A0A1W2PQD3 144 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 TUBAL3A6NHL2 446 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 TRPC5OSA6NMA1 111 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 CFLARO15519 480 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 BCAS1O75363 584 aaPredicted RBP9.76□□□□□ -0.85
SF3A1-203ENST00000444440 TNFRSF21O75509 655 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 CGAP01215 116 aa9.76□□□□□ -0.85
SF3A1-203ENST00000444440 LINGO3P0C6S8 592 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms