RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 FCMRO60667 390 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 SEMA7AO75326 666 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 H6PDO95479 791 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 UBL4AP11441 157 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 ETFAP13804 333 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 HOXB9P17482 250 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-211ENST00000443563 P2RX1P51575 399 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 ZNF41P51814 821 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-211ENST00000443563 SMSP52788 366 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 MVDP53602 400 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 SEC24CP53992 1094 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 CRISP3P54108 245 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 SUMO3P55854 103 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-211ENST00000443563 CRYZQ08257 329 aaKnown RBP9.84□□□□□ -0.83
HDAC6-211ENST00000443563 RGNQ15493 299 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 SYPL1Q16563 259 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 MMEL1Q495T6 779 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 GTDC1Q4AE62 458 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 PDZK1Q5T2W1 519 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 VASNQ6EMK4 673 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 TYW3Q6IPR3 259 aaKnown RBP9.84□□□□□ -0.83
HDAC6-211ENST00000443563 ZNF585AQ6P3V2 769 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 RPTNQ6XPR3 784 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 FRRS1Q6ZNA5 592 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 EIF3MQ7L2H7 374 aaKnown RBP9.84□□□□□ -0.83
HDAC6-211ENST00000443563 DHDDSQ86SQ9 333 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 METTL25Q8N6Q8 603 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 GATSQ8NAP1 163 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 PCYOX1LQ8NBM8 494 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 TOR1AIP2Q8NFQ8 470 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 PHF10Q8WUB8 498 aaKnown RBP9.84□□□□□ -0.83
HDAC6-211ENST00000443563 ZBTB8AQ96BR9 441 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 AURKBQ96GD4 344 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-211ENST00000443563 SFXN2Q96NB2 322 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 ELAC2Q9BQ52 826 aaKnown RBP9.84□□□□□ -0.83
HDAC6-211ENST00000443563 PIGQQ9BRB3 760 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 RTN4RQ9BZR6 473 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 FAM107BQ9H098 131 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-211ENST00000443563 PNPLA3Q9NST1 481 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 SPRR3Q9UBC9 169 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-211ENST00000443563 ERRFI1Q9UJM3 462 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-211ENST00000443563 MEMO1Q9Y316 297 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 CAPN7Q9Y6W3 813 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 POLEQ07864 2286 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 BAHCC1Q9P281 2608 aa9.84□□□□□ -0.83
HDAC6-211ENST00000443563 DNAJC13O75165 2243 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 TRBV5-3A0A0A0MS03 114 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 NPIPA5A0A0B4J1W7 369 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 A0A0G2JPF8 293 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 HNRNPCL2B2RXH8 293 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 HNRNPCL3B7ZW38 293 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 C5orf58C9J3I9 102 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 NPIPA7E9PJI5 369 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 ZIC3O60481 467 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 HNRNPCL1O60812 293 aaKnown RBP9.83□□□□□ -0.84
HDAC6-211ENST00000443563 UGT2B17O75795 530 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 NUDT14O95848 222 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 LDLRP01130 860 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 DBIP07108 87 aaKnown RBP9.83□□□□□ -0.84
HDAC6-211ENST00000443563 NPIPA8P0DM63 369 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 HNRNPCL4P0DMR1 293 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 BMP2P12643 396 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 PEPDP12955 493 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 CPN1P15169 458 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 ZNF17P17021 662 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 BMP7P18075 431 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 DRD4P21917 467 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 ACVR2AP27037 513 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 GYS2P54840 703 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 GFRA1P56159 465 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 ZNF117Q03924 483 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 CHRNEQ04844 493 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 SRSF1Q07955 248 aaKnown RBP eCLIP9.83□□□□□ -0.84
HDAC6-211ENST00000443563 FUT5Q11128 374 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 CBFBQ13951 182 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 NFYCQ13952 458 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 CYLC2Q14093 348 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-211ENST00000443563 FGFBP1Q14512 234 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 CD226Q15762 336 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 BCL2A1Q16548 175 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 ZSWIM7Q19AV6 140 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 EMC4Q5J8M3 183 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 PRAMEF8Q5VWM4 474 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 PRAMEF7Q5VXH5 474 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 RAET1LQ5VY80 246 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 DLEU7Q6UYE1 221 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 CMIPQ8IY22 773 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 PEX5LQ8IYB4 626 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 OR5M9Q8NGP3 310 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 SH3YL1Q96HL8 342 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-211ENST00000443563 ANKRD27Q96NW4 1050 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 TIMP4Q99727 224 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 SH3GL1Q99961 368 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 UGT2B28Q9BY64 529 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 PRDM14Q9GZV8 571 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 LAT2Q9GZY6 243 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 SLC38A1Q9H2H9 487 aa9.83□□□□□ -0.84
HDAC6-211ENST00000443563 ARMC7Q9H6L4 198 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms