RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 TNFAIP8L1Q8WVP5 186 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 NSMAFQ92636 917 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 C7orf50Q9BRJ6 194 aaKnown RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 ARHGAP9Q9BRR9 750 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 SLC25A18Q9H1K4 315 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 LRRN3Q9H3W5 708 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 CCDC86Q9H6F5 360 aaKnown RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 CXorf36Q9H7Y0 433 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 EQTNQ9NQ60 294 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 ASF1BQ9NVP2 202 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 ZSCAN32Q9NX65 697 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 KCNE1BA0A087WTH5 132 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 GLOD5A6NK44 160 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 WASH4PA8MWX3 477 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 PSMD9O00233 223 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 PRODHO43272 600 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 GJB5O95377 273 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 GYPBP06028 91 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 SNRPEP62304 92 aaKnown RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 CNTN1Q12860 1018 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 CAMK1Q14012 370 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 RPE65Q16518 533 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 UPP1Q16831 310 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 PYHIN1Q6K0P9 492 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 NDUFAF7Q7L592 441 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 OVCH2Q7RTZ1 564 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 COMMD6Q7Z4G1 85 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 TMEM99Q8N816 258 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 OR51L1Q8NGJ5 315 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 PEX11GQ96HA9 241 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 MED18Q9BUE0 208 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 RSPO3Q9BXY4 272 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 LMAN2LQ9H0V9 348 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 SMG9Q9H0W8 520 aaKnown RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 CHST8Q9H2A9 424 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 PRMT8Q9NR22 394 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 LRFN2Q9ULH4 789 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 DAPL1A0PJW8 107 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 LRIT2A6NDA9 550 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 POM121BA6NF01 834 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 AGAP14A8MT82 685 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 M0QZ92 97 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 FAAHO00519 579 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 KCNAB3O43448 404 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 SMAD6O43541 496 aaKnown RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 SIGLEC6O43699 453 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 RGS9O75916 674 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 FARS2O95363 451 aaKnown RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 ACP5P13686 325 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 ACRV1P26436 265 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 NOS3P29474 1203 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 IRS1P35568 1242 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 MAPK9P45984 424 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 PXNP49023 591 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 HCCSP53701 268 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 TAS2R41P59536 307 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 UBE2IP63279 158 aaKnown RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 RBM39Q14498 530 aaKnown RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 ZNF630Q2M218 657 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 C2orf68Q2NKX9 166 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 GPR33Q49SQ1 333 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 C9orf152Q5JTZ5 239 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 CDC73Q6P1J9 531 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 SLC27A4Q6P1M0 643 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 FGD2Q7Z6J4 655 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 OAFQ86UD1 273 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 CYB561A3Q8NBI2 242 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 OR51Q1Q8NH59 317 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 OR56B4Q8NH76 319 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 OR1S1Q8NH92 325 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 DOK4Q8TEW6 326 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 SCARB1Q8WTV0 552 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 TRIM43Q96BQ3 446 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 ZNF285Q96NJ3 590 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 TEFMQ96QE5 360 aaKnown RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 NKX3-1Q99801 234 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-214ENST00000441542 REEP4Q9H6H4 257 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 PDFQ9HBH1 243 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 NOX3Q9HBY0 568 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 MED11Q9P086 117 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 CTSFQ9UBX1 484 aa7.05□□□□□ -1.28
HDAC9-214ENST00000441542 A0A0G2JMZ2 1700 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 LRRC37A2A6NM11 1700 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 LTBP3Q9NS15 1303 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 TMEM202A6NGA9 273 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 A8MXK9 166 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 RNF13O43567 381 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 EFCAB14O75071 495 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 EIF3GO75821 320 aaKnown RBP eCLIP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 SLC25A27O95847 323 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 HEXBP07686 556 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 APEHP13798 732 aaKnown RBP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 CD52P31358 61 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 TIA1P31483 386 aaKnown RBP eCLIP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 PYCR1P32322 319 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 HOXA1P49639 335 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 RAB13P51153 203 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 CCR8P51685 355 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 EIF4EBP2Q13542 120 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 CLINT1Q14677 625 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms