RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 G3V2T6 193 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 H0YIV9 168 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 H3BSA7 217 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 KPNA3O00505 521 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 DLGAP1O14490 977 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 RFXANKO14593 260 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 EI24O14681 340 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 FPGTO14772 594 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 SCAMP1O15126 338 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CREG1O75629 220 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 RECQL5O94762 991 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR6B1O95007 311 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 LRATO95237 230 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 C1orf105O95561 183 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CPSF4O95639 269 aaKnown RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 DDAH2O95865 285 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 HPRP00739 348 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CST1P01037 141 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 RETP07949 1114 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 PCNAP12004 261 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 FCGR2AP12318 317 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF23P17027 643 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 AMD1P17707 334 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 IL1RNP18510 177 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 NELFEP18615 380 aaKnown RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 SDC1P18827 310 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 PRPS1L1P21108 318 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CDAP32320 146 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 MMP12P39900 470 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CAPGP40121 348 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 MTHFRP42898 656 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 GPR1P46091 355 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ASMTP46597 345 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ALDH3B2P48448 385 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 PCYT1AP49585 367 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 PRLHRP49683 370 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 GZMMP51124 257 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ALDH3A2P51648 485 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CTSCP53634 463 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 MFAP4P55083 255 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 DSCR9P59020 149 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 SEC61A1P61619 476 aaKnown RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ESRRGP62508 458 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ADARB1P78563 741 aaKnown RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ELP6Q0PNE2 266 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 LRRC74AQ0VAA2 488 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 GPM6BQ13491 265 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 NAE1Q13564 534 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 DOC2AQ14183 400 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 FGFBP1Q14512 234 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 PON2Q15165 354 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 HIST2H2ACQ16777 129 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 DUOXA1Q1HG43 343 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 HNRNPA1L2Q32P51 320 aaKnown RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 GTDC1Q4AE62 458 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CCSMST1Q4G0I0 132 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 KCTD21Q4G0X4 260 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMEM52BQ4KMG9 183 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CYBRD1Q53TN4 286 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF628Q5EBL2 1059 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CXorf66Q5JRM2 361 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CCNYL2Q5T2Q4 361 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 TTC23Q5W5X9 447 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 HIST2H2AA3Q6FI13 130 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR4F3Q6IEY1 312 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CAPN13Q6MZZ7 669 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ERICH5Q6P6B1 374 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 TSSK4Q6SA08 328 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ABRAXAS1Q6UWZ7 409 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ISLR2Q6UXK2 745 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 IL20RBQ6UXL0 311 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 GLDNQ6ZMI3 551 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 GCNT7Q6ZNI0 430 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CFAP77Q6ZQR2 320 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 Q6ZTC4 211 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CREB3L2Q70SY1 520 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 TRILQ7L0X0 811 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 PATL1Q86TB9 770 aaKnown RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 GPAT4Q86UL3 456 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 EPHX4Q8IUS5 362 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 CFAP206Q8IYR0 622 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 SLC22A15Q8IZD6 547 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 EID3Q8N140 333 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF786Q8N393 782 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 SVOPLQ8N434 492 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 PRR26Q8N8Z3 221 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZBTB8BQ8NAP8 495 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 POMGNT2Q8NAT1 580 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 POGLUT1Q8NBL1 392 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 DNAAF1Q8NEP3 725 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF555Q8NEP9 628 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR5K1Q8NHB7 308 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR14A16Q8NHC5 309 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 FBXO30Q8TB52 745 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 WDR20Q8TBZ3 569 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ADAMTS16Q8TE57 1224 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMEM170AQ8WVE7 144 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 SORCS1Q8WY21 1168 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ING5Q8WYH8 240 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR8D1Q8WZ84 308 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms