RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 RFXANKO14593 260 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 HCRTR2O43614 444 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 GMFGO60234 142 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 EIF4E2O60573 245 aaKnown RBP9.47□□□□□ -0.89
MCF2L-216ENST00000439475 TNFRSF21O75509 655 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 RCBTB2O95199 551 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 NUDT14O95848 222 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 IL18BPO95998 194 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 GUSBP08236 651 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 TMIGD3P0DMS9 266 aaPredicted RBP9.47□□□□□ -0.89
MCF2L-216ENST00000439475 OR12D1P0DN82 309 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 ZNF708P17019 499 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 ZNF17P17021 662 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 BMP5P22003 454 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 SSTR2P30874 369 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 EIF1P41567 113 aaKnown RBP9.47□□□□□ -0.89
MCF2L-216ENST00000439475 MAGEA8P43361 318 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 KHKP50053 298 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 LHX2P50458 406 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 P2RX1P51575 399 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 SUMO3P55854 103 aaPredicted RBP9.47□□□□□ -0.89
MCF2L-216ENST00000439475 HPCAP84074 193 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 GPR68Q15743 365 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 KLHL26Q53HC5 615 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 DCST1Q5T197 706 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 SAXO2Q658L1 398 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 OR2A2Q6IF42 318 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 MSANTD1Q6ZTZ1 278 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 SEM1Q6ZVN7 128 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 GRAMD2AQ8IUY3 354 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 MCEMP1Q8IX19 187 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 UBQLNLQ8IYU4 475 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 ARFGAP2Q8N6H7 521 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 TNIP2Q8NFZ5 429 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 CKAP2Q8WWK9 683 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 NEURL3Q96EH8 262 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 SH3YL1Q96HL8 342 aaPredicted RBP9.47□□□□□ -0.89
MCF2L-216ENST00000439475 ITCHQ96J02 903 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 TEX37Q96LM6 180 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 OR52B2Q96RD2 323 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 TUBA1CQ9BQE3 449 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 PRRG4Q9BZD6 226 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 RTN4RQ9BZR6 473 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 TCF7L2Q9NQB0 619 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 POLE3Q9NRF9 147 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 LIPT1Q9Y234 373 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 ZNF337Q9Y3M9 751 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 WDR45Q9Y484 360 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 KCNE3Q9Y6H6 103 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 CACNA1CQ13936 2221 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 CYSRT1A8MQ03 144 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 C19orf84I3L1E1 186 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 ZNF195O14628 629 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 ZNF264O43296 627 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 ME2P23368 584 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 ADH6P28332 368 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 IL12AP29459 219 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 ASCL1P50553 236 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 POLR2JP52435 117 aaKnown RBP9.46□□□□□ -0.9
MCF2L-216ENST00000439475 CLDN18P56856 261 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 B3GALT5-AS1P59052 145 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 RAC1P63000 192 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 GPAT3Q53EU6 434 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 HSP90B2PQ58FF3 399 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 TNFAIP8L2Q6P589 184 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-216ENST00000439475 ZAR1Q86SH2 424 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 LIX1LQ8IVB5 337 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 CLEC4FQ8N1N0 589 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 TOR1AIP2Q8NFQ8 470 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 SMPDL3BQ92485 455 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 ROPN1LQ96C74 230 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 C14orf79Q96F83 325 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 NMUR2Q9GZQ4 415 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 SLCO1B3Q9NPD5 702 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 SDR39U1Q9NRG7 319 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-216ENST00000439475 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-216ENST00000439475 MED17Q9NVC6 651 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 PTPN13Q12923 2485 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 DOPEY1Q5JWR5 2465 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 USP9XQ93008 2570 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-216ENST00000439475 HCFC1P51610 2035 aa9.46□□□□□ -0.9
MCF2L-216ENST00000439475 UQCRHLA0A096LP55 91 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 NPIPA5A0A0B4J1W7 369 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 FAM234BA2RU67 622 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 C7orf72A4D263 438 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 TMEM247A6NEH6 219 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 SERINC4A6NH21 518 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 SLC22A20A6NK97 555 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 GJE1A6NN92 205 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 C17orf51A8MQB3 221 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 NPIPA7E9PJI5 369 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 SYT5O00445 386 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 SEC14L5O43304 696 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 GSNP06396 782 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 CRHP06850 196 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 ZCCHC18P0CG32 403 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 NPIPA8P0DM63 369 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 UBL4AP11441 157 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 UQCRC1P31930 480 aa9.45□□□□□ -0.9
MCF2L-216ENST00000439475 IDH3AP50213 366 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms