RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 OTUB2Q96DC9 234 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 POT1Q9NUX5 634 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 TMEM45AQ9NWC5 275 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 MGAT4CQ9UBM8 478 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 UBQLN2Q9UHD9 624 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 FBXL3Q9UKT7 428 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 FAM186AA6NE01 2351 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 A0A1W2PPL8 197 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 A0A1W2PQU0 124 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 C1orf226A1L170 272 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 FAM25EA8MYX2 175 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 L7N2F9 121 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 LILRB3O75022 631 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 SEMA7AO75326 666 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 CDC123O75794 336 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 RPP14O95059 124 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 CLUP10909 449 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 NPR2P20594 1047 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 PKLRP30613 574 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 PSMB10P40306 273 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 ACTR1BP42025 376 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 XCR1P46094 333 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 SOX2P48431 317 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 RGS8P57771 180 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 ACTR1AP61163 376 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 BNC1Q01954 994 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 PDGFRLQ15198 375 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 AANATQ16613 207 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 GLYR1Q49A26 553 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 GXYLT1Q4G148 440 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 CDKL4Q5MAI5 379 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 FAM71E1Q6IPT2 247 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 PGBD2Q6P3X8 592 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 FAM198BQ6UWH4 519 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 KIAA0907Q7Z7F0 614 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 COMTD1Q86VU5 262 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 ADGRF3Q8IZF5 1079 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 OR9A2Q8NGT5 310 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 MOSPD2Q8NHP6 518 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 TRMT10AQ8TBZ6 339 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 ADAMTS15Q8TE58 950 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 TM4SF18Q96CE8 201 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 LMLNQ96KR4 655 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 TOX2Q96NM4 488 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 ABHD1Q96SE0 405 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 RPP25Q9BUL9 199 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 RNF32Q9H0A6 362 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 ARL6Q9H0F7 186 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 STARD5Q9NSY2 213 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 FTSJ1Q9UET6 329 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 TOR1AO14656 332 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 ARPC1BO15143 372 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 CHST10O43529 356 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 UGDHO60701 494 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 HPXP02790 462 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 RPN2P04844 631 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 FBXO45P0C2W1 286 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 GABRB1P18505 474 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 TBXA2RP21731 343 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 RPL3P39023 403 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 MC3RP41968 323 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 SELENOPP49908 381 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 TUSC1Q2TAM9 212 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 MZT2AQ6P582 158 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 TMEM91Q6ZNR0 172 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 VRK2Q86Y07 508 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 KLHDC8AQ8IYD2 350 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 ARL14Q8N4G2 192 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 GPR32P1Q8NGA4 272 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 C2CD4CQ8TF44 421 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 SIGLEC11Q96RL6 698 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 CDCA4Q9BXL8 241 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 IL23AQ9NPF7 189 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 NDUFB11Q9NX14 153 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 ATG4BQ9Y4P1 393 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 KCNE3Q9Y6H6 103 aa9.29□□□□□ -0.92
CDC42SE1-202ENST00000439374 DAPL1A0PJW8 107 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 TMEM229AB2RXF0 380 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 ASGR2P07307 311 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 SRPRAP08240 638 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 SAGP10523 405 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 HSD3B1P14060 373 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 HSD3B2P26439 372 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 LCN1P31025 176 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 MRPL19P49406 292 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 PPP3R1P63098 170 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 ZNF311Q5JNZ3 666 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 NHLRC1Q6VVB1 395 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 NRMQ8IXM6 262 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 TOR1AIP2Q8NFQ8 470 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 OR2L2Q8NH16 312 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 GRHL3Q8TE85 626 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 ZNF707Q96C28 371 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 NXF2Q9GZY0 626 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 ZNF768Q9H5H4 540 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 PHPT1Q9NRX4 125 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 SPHK1Q9NYA1 384 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 NPAP1Q9NZP6 1156 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 CPNE7Q9UBL6 633 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 TNFRSF10DQ9UBN6 386 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms