RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 GRHL2Q6ISB3 625 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 CELF5Q8N6W0 485 aaKnown RBP14.82□□□□□ -0.04
DHFR-201ENST00000439211 GLYATL1Q969I3 302 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 ADAT1Q9BUB4 502 aaKnown RBP14.82□□□□□ -0.04
DHFR-201ENST00000439211 SPATA5L1Q9BVQ7 753 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 LINC00597Q9H2U6 94 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 PLEKHA6Q9Y2H5 1048 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 PQLC2LA1A4F0 135 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 EIF1BO60739 113 aaKnown RBP14.81□□□□□ -0.04
DHFR-201ENST00000439211 FARS2O95363 451 aaKnown RBP14.81□□□□□ -0.04
DHFR-201ENST00000439211 PPP3CBP16298 524 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 IL1RNP18510 177 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 EIF1P41567 113 aaKnown RBP14.81□□□□□ -0.04
DHFR-201ENST00000439211 SELENOPP49908 381 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 GZMMP51124 257 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 WNT3P56703 355 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 CYB5R2Q6BCY4 276 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 NAA40Q86UY6 237 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 TET1Q8NFU7 2136 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 CPNE2Q96FN4 548 aaPredicted RBP14.81□□□□□ -0.04
DHFR-201ENST00000439211 PPP1R3EQ9H7J1 279 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 BPTFQ12830 3046 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 TMEM200CA6NKL6 621 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 SLC16A5O15375 505 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 ALPPL2P10696 532 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 NPR2P20594 1047 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 WNT4P56705 351 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 ZXDCQ2QGD7 858 aaPredicted RBP14.81□□□□□ -0.04
DHFR-201ENST00000439211 NHLRC3Q5JS37 347 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 SIAH3Q8IW03 269 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 SLC30A8Q8IWU4 369 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 AKR7LQ8NHP1 331 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 ALG14Q96F25 216 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 BBS4Q96RK4 519 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 EFCAB11Q9BUY7 163 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 NMNAT1Q9HAN9 279 aaPredicted RBP14.81□□□□□ -0.04
DHFR-201ENST00000439211 LGI1O95970 557 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 PTGER1P34995 402 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 SLC16A1P53985 500 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 ZNF630Q2M218 657 aaPredicted RBP14.81□□□□□ -0.04
DHFR-201ENST00000439211 PABPC1L2AQ5JQF8 200 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 GPR135Q8IZ08 494 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 IQCF1Q8N6M8 205 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 BPIFCQ8NFQ6 507 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 OR52N2Q8NGI0 321 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 ADAMTS19Q8TE59 1207 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 ZNF471Q9BX82 626 aaPredicted RBP14.81□□□□□ -0.04
DHFR-201ENST00000439211 RPS6KB2Q9UBS0 482 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 BTNL2Q9UIR0 455 aa14.81□□□□□ -0.04
DHFR-201ENST00000439211 CRYBA1P05813 215 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 ACAA1P09110 424 aaPredicted RBP14.8□□□□□ -0.04
DHFR-201ENST00000439211 HK1P19367 917 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 IMPA1P29218 277 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 PLK5Q496M5 336 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 LINGO2Q7L985 606 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 DPPA2Q7Z7J5 298 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 MEX3DQ86XN8 651 aaKnown RBP14.8□□□□□ -0.04
DHFR-201ENST00000439211 RASGEF1AQ8N9B8 481 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 TEX12Q9BXU0 123 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 EQTNQ9NQ60 294 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 CCL26Q9Y258 94 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 A0A1B0GV90 55 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 A8MXK9 166 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 PAK4O96013 591 aaPredicted RBP14.8□□□□□ -0.04
DHFR-201ENST00000439211 RFC3P40938 356 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 PSMD4P55036 377 aaKnown RBP14.8□□□□□ -0.04
DHFR-201ENST00000439211 ZNF385BQ569K4 471 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 MLIPQ5VWP3 458 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 C18orf63Q68DL7 685 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 TMUB2Q71RG4 321 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 C17orf64Q86WR6 236 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 OR56B4Q8NH76 319 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 ZNF480Q8WV37 535 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 SCMH1Q96GD3 660 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 MFFQ9GZY8 342 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 ZNF275Q9NSD4 429 aaPredicted RBP14.8□□□□□ -0.04
DHFR-201ENST00000439211 ARPC1BO15143 372 aaKnown RBP14.8□□□□□ -0.04
DHFR-201ENST00000439211 LANCL1O43813 399 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 PTNP21246 168 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 PTGFRP43088 359 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 VEGFCP49767 419 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 NR0B1P51843 470 aaKnown RBP14.8□□□□□ -0.04
DHFR-201ENST00000439211 MTAPQ13126 283 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 ALKBH1Q13686 389 aaKnown RBP14.8□□□□□ -0.04
DHFR-201ENST00000439211 ALKBH2Q6NS38 261 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 REEP3Q6NUK4 255 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 CMIPQ8IY22 773 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 MMP21Q8N119 569 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 GOT1L1Q8NHS2 421 aaPredicted RBP14.8□□□□□ -0.04
DHFR-201ENST00000439211 TRMT10AQ8TBZ6 339 aaKnown RBP14.8□□□□□ -0.04
DHFR-201ENST00000439211 C16orf78Q8WTQ4 265 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 C7orf34Q96L11 122 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 TMEM185BQ9H7F4 350 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 ASF1BQ9NVP2 202 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 HCFC1R1Q9NWW0 138 aa14.8□□□□□ -0.04
DHFR-201ENST00000439211 ARID1AO14497 2285 aa14.79□□□□□ -0.04
DHFR-201ENST00000439211 ABHD14A-ACY1A0A1B0GW23 586 aa14.79□□□□□ -0.04
DHFR-201ENST00000439211 GFYI3L273 518 aa14.79□□□□□ -0.04
DHFR-201ENST00000439211 SNAPINO95295 136 aa14.79□□□□□ -0.04
DHFR-201ENST00000439211 GASTP01350 101 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms