RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 SLAMF8Q9P0V8 285 aa8.38□□□□□ -1.07
AC011228.1-201ENST00000439027 BTNL2Q9UIR0 455 aa8.38□□□□□ -1.07
AC011228.1-201ENST00000439027 PCDHGB4Q9UN71 923 aa8.38□□□□□ -1.07
AC011228.1-201ENST00000439027 EDARQ9UNE0 448 aa8.38□□□□□ -1.07
AC011228.1-201ENST00000439027 PLEKHA6Q9Y2H5 1048 aa8.38□□□□□ -1.07
AC011228.1-201ENST00000439027 C15orf41Q9Y2V0 281 aa8.38□□□□□ -1.07
AC011228.1-201ENST00000439027 ZNF780BQ9Y6R6 833 aa8.38□□□□□ -1.07
AC011228.1-201ENST00000439027 ARHGAP21Q5T5U3 1957 aa8.38□□□□□ -1.07
AC011228.1-201ENST00000439027 A0A096LPI6 279 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 A6NNC1 897 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 MYO1GB0I1T2 1018 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 EEF1E1-BLOC1S5C9J1V9 151 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 EEF1E1O43324 174 aaKnown RBP8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 ERN1O75460 977 aaKnown RBP8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 PPM1BO75688 479 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 ANP32DO95626 131 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 HPNP05981 417 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 GSNP06396 782 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 BMP7P18075 431 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 CSNK2A2P19784 350 aaPredicted RBP8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 ABCD3P28288 659 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 PTPN6P29350 595 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 MPIP34949 423 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 TIMP3P35625 211 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 CPOXP36551 454 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 FRKP42685 505 aaPredicted RBP8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 CDKN2CP42773 168 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 NCBP2P52298 156 aaKnown RBP eCLIP8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 PSME3P61289 254 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 DUSP2Q05923 314 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 LRRC74AQ0VAA2 488 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 PLCXD2Q0VAA5 305 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 EXOSC7Q15024 291 aaKnown RBP8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 CEBPEQ15744 281 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 FLYWCH1Q4VC44 716 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 NSUN5P2Q63ZY6 315 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 TIGD3Q6B0B8 471 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 VASNQ6EMK4 673 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 FAM111BQ6SJ93 734 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 C16orf89Q6UX73 402 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 DLEU7Q6UYE1 221 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 HACD2Q6Y1H2 254 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 DNAJC14Q6Y2X3 702 aaPredicted RBP8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 ZNF551Q7Z340 670 aaPredicted RBP8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 CDC20BQ86Y33 519 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 SAMD14Q8IZD0 417 aaPredicted RBP8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 DEFB107AQ8IZN7 70 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 VWA5B2Q8N398 1253 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 ADCY4Q8NFM4 1077 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 OR1J4Q8NGS1 313 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 ZFP28Q8NHY6 868 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 OR5P2Q8WZ92 322 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 LRRC58Q96CX6 371 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 CNRIP1Q96F85 164 aaPredicted RBP8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 ZBED6CLQ96FA7 236 aaPredicted RBP8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 ZNF681Q96N22 645 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 AMDHD1Q96NU7 426 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 PANX1Q96RD7 426 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 FOXC2Q99958 501 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 SLC39A3Q9BRY0 314 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 BTBD10Q9BSF8 475 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 UGT2B28Q9BY64 529 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 PAIP1Q9H074 479 aaKnown RBP8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 C1orf21Q9H246 121 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 UBQLN3Q9H347 655 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 GLIPR2Q9H4G4 154 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 RASSF1Q9NS23 344 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 ACSS1Q9NUB1 689 aaPredicted RBP8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 NDE1Q9NXR1 346 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 KLRF1Q9NZS2 232 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 ZNF629Q9UEG4 869 aaPredicted RBP8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 ST6GALNAC2Q9UJ37 374 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 CFL2Q9Y281 166 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 DTX4Q9Y2E6 619 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 PCDHB14Q9Y5E9 798 aa8.37□□□□□ -1.07
AC011228.1-201ENST00000439027 TUBAL3A6NHL2 446 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 ANKRD65E5RJM6 399 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 FXYD1O00168 92 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 NPPAP01160 153 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 VSIG8P0DPA2 414 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 CYP4B1P13584 511 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 NAGAP17050 411 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 S1PR1P21453 382 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 CTSSP25774 331 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 GPC1P35052 558 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 ZNF136P52737 540 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 HBA1P69905 142 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 SRYQ05066 204 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 MAP4K2Q12851 820 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 HSPB3Q12988 150 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 GTDC1Q4AE62 458 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 DNAL1Q4LDG9 190 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 DCST1Q5T197 706 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 LRIF1Q5T3J3 769 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 FNDC7Q5VTL7 733 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 SLC30A6Q6NXT4 461 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 ASRGL1Q7L266 308 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 NUP54Q7Z3B4 507 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 KIF18BQ86Y91 864 aa8.36□□□□□ -1.07
AC011228.1-201ENST00000439027 TGIF2LYQ8IUE0 185 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms