RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 SOX8P57073 446 aa21.1■□□□□ 0.97
CPSF4-204ENST00000436336 PLAURQ03405 335 aa21.1■□□□□ 0.97
CPSF4-204ENST00000436336 OR2T5Q6IEZ7 315 aa21.1■□□□□ 0.97
CPSF4-204ENST00000436336 OR2T29Q8NH02 315 aa21.1■□□□□ 0.97
CPSF4-204ENST00000436336 NODALQ96S42 347 aa21.1■□□□□ 0.97
CPSF4-204ENST00000436336 SEMA6AQ9H2E6 1030 aa21.1■□□□□ 0.97
CPSF4-204ENST00000436336 CCDC86Q9H6F5 360 aaKnown RBP21.1■□□□□ 0.97
CPSF4-204ENST00000436336 DNAJB12Q9NXW2 375 aaKnown RBP21.1■□□□□ 0.97
CPSF4-204ENST00000436336 HEATR5AQ86XA9 2040 aa21.1■□□□□ 0.97
CPSF4-204ENST00000436336 GNGT2O14610 69 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 TP53I11O14683 189 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 FRS3O43559 492 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 DPM1O60762 260 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 DNAJB5O75953 348 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 DIRAS1O95057 198 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 NPTX1Q15818 432 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 DEF8Q6ZN54 512 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 CYP4Z1Q86W10 505 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 PHOSPHO1Q8TCT1 267 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 RNF138Q8WVD3 245 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 CNOT9Q92600 299 aaKnown RBP21.09■□□□□ 0.97
CPSF4-204ENST00000436336 BCAS1O75363 584 aaPredicted RBP21.09■□□□□ 0.97
CPSF4-204ENST00000436336 PRSS23O95084 383 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 RPP38P78345 283 aaKnown RBP21.09■□□□□ 0.97
CPSF4-204ENST00000436336 CD226Q15762 336 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 IL20RBQ6UXL0 311 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 GALNT16Q8N428 558 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 FAM71CQ8NEG0 241 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 OR10G3Q8NGC4 313 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 GRHL3Q8TE85 626 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 SECISBP2Q96T21 854 aaKnown RBP21.09■□□□□ 0.97
CPSF4-204ENST00000436336 SSUH2Q9Y2M2 353 aa21.09■□□□□ 0.97
CPSF4-204ENST00000436336 AP3D1O14617 1153 aa21.08■□□□□ 0.97
CPSF4-204ENST00000436336 CASQ2O14958 399 aaPredicted RBP21.08■□□□□ 0.97
CPSF4-204ENST00000436336 EFSO43281 561 aa21.08■□□□□ 0.97
CPSF4-204ENST00000436336 NDUFB5O43674 189 aa21.08■□□□□ 0.97
CPSF4-204ENST00000436336 UBL4AP11441 157 aa21.08■□□□□ 0.97
CPSF4-204ENST00000436336 YAP1P46937 504 aaKnown RBP21.08■□□□□ 0.97
CPSF4-204ENST00000436336 ZNF136P52737 540 aa21.08■□□□□ 0.97
CPSF4-204ENST00000436336 ZNF550Q7Z398 422 aa21.08■□□□□ 0.97
CPSF4-204ENST00000436336 MARCH3Q86UD3 253 aa21.08■□□□□ 0.97
CPSF4-204ENST00000436336 RANBP3LQ86VV4 465 aaPredicted RBP21.08■□□□□ 0.97
CPSF4-204ENST00000436336 ZNF440Q8IYI8 595 aa21.08■□□□□ 0.97
CPSF4-204ENST00000436336 GATSQ8NAP1 163 aa21.08■□□□□ 0.97
CPSF4-204ENST00000436336 PIP5K1AQ99755 562 aa21.08■□□□□ 0.97
CPSF4-204ENST00000436336 ING2Q9H160 280 aa21.08■□□□□ 0.97
CPSF4-204ENST00000436336 NTN4Q9HB63 628 aa21.08■□□□□ 0.97
CPSF4-204ENST00000436336 EXOSC3Q9NQT5 275 aaKnown RBP21.08■□□□□ 0.97
CPSF4-204ENST00000436336 HPF1Q9NWY4 346 aa21.08■□□□□ 0.97
CPSF4-204ENST00000436336 TESQ9UGI8 421 aaKnown RBP21.08■□□□□ 0.97
CPSF4-204ENST00000436336 J3KTA2 159 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 ADAMDEC1O15204 470 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 ZNF264O43296 627 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 SEMA7AO75326 666 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 ANGPTL1O95841 491 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 UBTFL6P0CB48 400 aaPredicted RBP21.07■□□□□ 0.96
CPSF4-204ENST00000436336 TRIP10Q15642 601 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 ABHD17BQ5VST6 288 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 TMEM81Q6P7N7 255 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 ZNF605Q86T29 641 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 MISPQ8IVT2 679 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 GPALPP1Q8IXQ4 340 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 PHF10Q8WUB8 498 aaKnown RBP21.07■□□□□ 0.96
CPSF4-204ENST00000436336 NR4A3Q92570 626 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 PRRC1Q96M27 445 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 STMN3Q9NZ72 180 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 ABI3Q9P2A4 366 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 ACAD8Q9UKU7 415 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 GTPBP1O00178 669 aaKnown RBP21.07■□□□□ 0.96
CPSF4-204ENST00000436336 TPST2O60704 377 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 FMO6PO60774 539 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 GKN3PP0CG01 181 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 BEST3Q8N1M1 668 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 MCHR1Q99705 422 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 RTN4RQ9BZR6 473 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 REEP1Q9H902 201 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 A4GNTQ9UNA3 340 aa21.07■□□□□ 0.96
CPSF4-204ENST00000436336 CHCHD2Q9Y6H1 151 aaPredicted RBP21.07■□□□□ 0.96
CPSF4-204ENST00000436336 FREM2Q5SZK8 3169 aa21.06■□□□□ 0.96
CPSF4-204ENST00000436336 SCO2O43819 266 aa21.06■□□□□ 0.96
CPSF4-204ENST00000436336 RRM2P31350 389 aa21.06■□□□□ 0.96
CPSF4-204ENST00000436336 EIF2S3P41091 472 aaKnown RBP21.06■□□□□ 0.96
CPSF4-204ENST00000436336 ICA1LQ8NDH6 482 aa21.06■□□□□ 0.96
CPSF4-204ENST00000436336 GATA6Q92908 595 aa21.06■□□□□ 0.96
CPSF4-204ENST00000436336 SGCZQ96LD1 299 aa21.06■□□□□ 0.96
CPSF4-204ENST00000436336 POLR2J2Q9GZM3 115 aaKnown RBP21.06■□□□□ 0.96
CPSF4-204ENST00000436336 LAT2Q9GZY6 243 aa21.06■□□□□ 0.96
CPSF4-204ENST00000436336 POLR2J3Q9H1A7 115 aaKnown RBP21.06■□□□□ 0.96
CPSF4-204ENST00000436336 METTL7AQ9H8H3 244 aa21.06■□□□□ 0.96
CPSF4-204ENST00000436336 KLRF1Q9NZS2 232 aa21.06■□□□□ 0.96
CPSF4-204ENST00000436336 TESMINQ9Y4I5 508 aa21.06■□□□□ 0.96
CPSF4-204ENST00000436336 CDK2AP1O14519 115 aa21.05■□□□□ 0.96
CPSF4-204ENST00000436336 ADAM10O14672 748 aa21.05■□□□□ 0.96
CPSF4-204ENST00000436336 FFAR1O14842 300 aa21.05■□□□□ 0.96
CPSF4-204ENST00000436336 EIF4E2O60573 245 aaKnown RBP21.05■□□□□ 0.96
CPSF4-204ENST00000436336 CYP7B1O75881 506 aa21.05■□□□□ 0.96
CPSF4-204ENST00000436336 PRG2P13727 222 aa21.05■□□□□ 0.96
CPSF4-204ENST00000436336 GCKP35557 465 aa21.05■□□□□ 0.96
CPSF4-204ENST00000436336 ST13P50502 369 aaKnown RBP21.05■□□□□ 0.96
CPSF4-204ENST00000436336 HLCSP50747 726 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms