RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 SIM1P81133 766 aaPredicted RBP9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 QPRTQ15274 297 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 GPR68Q15743 365 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 RASSF6Q6ZTQ3 369 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 RD3Q7Z3Z2 195 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 GDF7Q7Z4P5 450 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 LINC00469Q8N7U9 141 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 MFSD9Q8NBP5 474 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 ZBTB44Q8NCP5 570 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 SLC7A6Q92536 515 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 MCHR1Q99705 422 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 C11orf54Q9H0W9 315 aaPredicted RBP9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 COMMD3Q9UBI1 195 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 LAMA1P25391 3075 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 ARHGEF17Q96PE2 2063 aaPredicted RBP9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 GPR89AB7ZAQ6 455 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 SURF4O15260 269 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 P2RX6O15547 441 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 GPR89BP0CG08 455 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 POU3F3P20264 500 aaPredicted RBP9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 INPP1P49441 399 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 ST3GAL3Q11203 375 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 CEBPEQ15744 281 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 AADACL4Q5VUY2 407 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 VASNQ6EMK4 673 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 QSOX2Q6ZRP7 698 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 RRM2BQ7LG56 351 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 LINC00471Q8N535 108 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 POGLUT1Q8NBL1 392 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 APOOQ9BUR5 198 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 TRIM45Q9H8W5 580 aaPredicted RBP9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 TBC1D17Q9HA65 648 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 FANCFQ9NPI8 374 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 FBXO34Q9NWN3 711 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 SLC13A4Q9UKG4 626 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 PCDHGB2Q9Y5G2 931 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 A0A0B4J293 547 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 ZNF860A6NHJ4 632 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 SYT5O00445 386 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 POU2F2P09086 479 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 CELP19835 753 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 APEX1P27695 318 aaKnown RBP9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 ENPP2Q13822 863 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 MAPK14Q16539 360 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.7□□□□□ -0.861e-6■■□□□ 12.5
CLSTN1-203ENST00000435891 GLCCI1Q86VQ1 547 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 ATP6V1C2Q8NEY4 427 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 CHAC2Q8WUX2 184 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 FGF14Q92915 247 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 OTULINQ96BN8 352 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 RNF31Q96EP0 1072 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 ACTRT3Q9BYD9 372 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 PPIL3Q9H2H8 161 aaKnown RBP9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 IGFLR1Q9H665 355 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 ZNF780BQ9Y6R6 833 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 GON4LQ3T8J9 2241 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 NPIPA5A0A0B4J1W7 369 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 C2orf92A0A1B0GVN3 265 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 NPIPA7E9PJI5 369 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 STK25O00506 426 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 RNGTTO60942 597 aaKnown RBP9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 NPIPA8P0DM63 369 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 RAB14P61106 215 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 STXBP1P61764 594 aaKnown RBP9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 RPS21P63220 83 aaKnown RBP9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 P2RY14Q15391 338 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 DUSP5Q16690 384 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 DEFB134Q4QY38 66 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 MFSD12Q6NUT3 480 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 PLET1Q6UQ28 207 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 HSDL2Q6YN16 418 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 WDR88Q6ZMY6 472 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 SIRT6Q8N6T7 355 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 CLDN22Q8N7P3 220 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 FAM181AQ8N9Y4 354 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 ADAMTS15Q8TE58 950 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 UFD1Q92890 307 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 SARGQ9BW04 601 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 MED20Q9H944 212 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 HINT3Q9NQE9 182 aaKnown RBP9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 IL20Q9NYY1 176 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 ZNF624Q9P2J8 865 aaPredicted RBP9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 DPP7Q9UHL4 492 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 SLC7A7Q9UM01 511 aa9.7□□□□□ -0.86
CLSTN1-203ENST00000435891 TBC1D3DA0A087WVF3 549 aa9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 TBC1D3IA0A087WXS9 549 aa9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 TBC1D3EA0A087X179 549 aa9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 TBC1D3KA0A087X1G2 549 aa9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 TBC1D3FA6NER0 549 aaPredicted RBP9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 TBC1D3LB9A6J9 549 aa9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 PLA2G10O15496 165 aa9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 KLF4O43474 513 aa9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 CTSVO60911 334 aa9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 TBC1D3HP0C7X1 549 aa9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 GKN3PP0CG01 181 aa9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 GDI1P31150 447 aa9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 FXYD6P3P58550 94 aa9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 TRMT12Q53H54 448 aaKnown RBP9.69□□□□□ -0.86
CLSTN1-203ENST00000435891 PDZK1Q5T2W1 519 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms