RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 RNF145Q96MT1 663 aa19.57■□□□□ 0.72
RPUSD3-206ENST00000433535 TMEM109Q9BVC6 243 aa19.57■□□□□ 0.72
RPUSD3-206ENST00000433535 PRRG4Q9BZD6 226 aa19.57■□□□□ 0.72
RPUSD3-206ENST00000433535 ZCCHC3Q9NUD5 404 aaKnown RBP19.57■□□□□ 0.72
RPUSD3-206ENST00000433535 MED17Q9NVC6 651 aa19.57■□□□□ 0.72
RPUSD3-206ENST00000433535 TRAF6Q9Y4K3 522 aa19.57■□□□□ 0.72
RPUSD3-206ENST00000433535 A0A087WZY1 265 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 C16orf97H3BN30 126 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 NPHS1O60500 1241 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 SPAG7O75391 227 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 FOSL1P15407 271 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 RNF144AP50876 292 aaPredicted RBP19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 ZNF41P51814 821 aaPredicted RBP19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 NKX6-1P78426 367 aaPredicted RBP19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 OCRLQ01968 901 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 IFFO1Q0D2I5 559 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 PLPPR5Q32ZL2 321 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 KRTAP21-3Q3LHN1 58 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 EXOSC6Q5RKV6 272 aaKnown RBP19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 R3HCC1LQ7Z5L2 792 aaKnown RBP19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 CDS1Q92903 461 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 MTERF3Q96E29 417 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 ADGRG7Q96K78 797 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 HS3ST6Q96QI5 342 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 SMR3AQ99954 134 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 C1orf50Q9BV19 199 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 KLHL4Q9C0H6 718 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 UBTD1Q9HAC8 227 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 UBQLN4Q9NRR5 601 aa19.56■□□□□ 0.72
RPUSD3-206ENST00000433535 UQCRHLA0A096LP55 91 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 TNFSF11O14788 317 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 CXCL13O43927 109 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 PLGP00747 810 aaPredicted RBP19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 HMGN2P05204 90 aaKnown RBP19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 FGF4P08620 206 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 HPGDP15428 266 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 PSMA4P25789 261 aaKnown RBP19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 ARRB2P32121 409 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 PRIM2P49643 509 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 POU6F2P78424 691 aaPredicted RBP19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 LASP1Q14847 261 aaKnown RBP19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 PTGR1Q14914 329 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 XKR7Q5GH72 579 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 WDR75Q8IWA0 830 aaKnown RBP19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 NUDT8Q8WV74 236 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 ZBTB8AQ96BR9 441 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 STOML1Q9UBI4 398 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 ATP6V1HQ9UI12 483 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 EMC9Q9Y3B6 208 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 SNX8Q9Y5X2 465 aa19.55■□□□□ 0.72
RPUSD3-206ENST00000433535 NPIPA5A0A0B4J1W7 369 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 TMEM114B3SHH9 223 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 NPIPA7E9PJI5 369 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 SCDO00767 359 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 PEX11AO75192 247 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 NPIPA8P0DM63 369 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 LAMP1P11279 417 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 IL11P20809 199 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 SERPINB4P48594 390 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 ZCCHC12Q6PEW1 402 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 LRIG3Q6UXM1 1119 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 OR6K3Q8NGY3 331 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 POC1BQ8TC44 478 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 GMPPAQ96IJ6 420 aaPredicted RBP19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 MARK4Q96L34 752 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 PPP3R2Q96LZ3 170 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 C3orf30Q96M34 536 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 BTBD2Q9BX70 525 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 EML4Q9HC35 981 aaKnown RBP19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 GIN1Q9NXP7 522 aa19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 MCTS1Q9ULC4 181 aaKnown RBP19.54■□□□□ 0.72
RPUSD3-206ENST00000433535 RAI1Q7Z5J4 1906 aaPredicted RBP19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 C7orf72A4D263 438 aa19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 SS18L1O75177 396 aaPredicted RBP19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 SKAP2O75563 359 aaPredicted RBP19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 MAPK1P28482 360 aa19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 CTBP2P56545 445 aa19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 ZNF844Q08AG5 666 aa19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 TP53BP2Q13625 1128 aa19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 MLC1Q15049 377 aa19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 Q5PR19 223 aa19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 Q71RC1 249 aaPredicted RBP19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 OR2V1Q8NHB1 315 aa19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 B4GALNT2Q8NHY0 566 aa19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 TCP10LQ8TDR4 215 aa19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 ACTRT2Q8TDY3 377 aa19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 C18orf12Q96KH6 178 aa19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 HHATLQ9HCP6 504 aa19.53■□□□□ 0.72
RPUSD3-206ENST00000433535 A0A0J9YW62 118 aa19.52■□□□□ 0.72
RPUSD3-206ENST00000433535 A0A1W2PQD3 144 aa19.52■□□□□ 0.72
RPUSD3-206ENST00000433535 ADAMDEC1O15204 470 aa19.52■□□□□ 0.72
RPUSD3-206ENST00000433535 OIP5O43482 229 aa19.52■□□□□ 0.72
RPUSD3-206ENST00000433535 SMPD2O60906 423 aa19.52■□□□□ 0.72
RPUSD3-206ENST00000433535 SYNGR4O95473 234 aa19.52■□□□□ 0.72
RPUSD3-206ENST00000433535 ME2P23368 584 aa19.52■□□□□ 0.72
RPUSD3-206ENST00000433535 LOXP28300 417 aaPredicted RBP19.52■□□□□ 0.72
RPUSD3-206ENST00000433535 SHC1P29353 583 aa19.52■□□□□ 0.72
RPUSD3-206ENST00000433535 LCN1P31025 176 aa19.52■□□□□ 0.72
RPUSD3-206ENST00000433535 RAC1P63000 192 aa19.52■□□□□ 0.72
RPUSD3-206ENST00000433535 ZNF117Q03924 483 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms