RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 RIPK1Q13546 671 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 CENPPQ6IPU0 288 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 ZNF600Q6ZNG1 722 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 CADM2Q8N3J6 435 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 TRUB1Q8WWH5 349 aaKnown RBP4.73□□□□□ -1.65
USP54-206ENST00000433394 SLC5A11Q8WWX8 675 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 N4BP2L2Q92802 583 aaPredicted RBP4.73□□□□□ -1.65
USP54-206ENST00000433394 SH3YL1Q96HL8 342 aaPredicted RBP4.73□□□□□ -1.65
USP54-206ENST00000433394 PIWIL1Q96J94 861 aaKnown RBP4.73□□□□□ -1.65
USP54-206ENST00000433394 SLC39A3Q9BRY0 314 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 TUBGCP2Q9BSJ2 902 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 NXF5Q9H1B4 397 aaKnown RBP4.73□□□□□ -1.65
USP54-206ENST00000433394 GORASP2Q9H8Y8 452 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 ARMCX1Q9P291 453 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 NPIPA1Q9UND3 350 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 MAB21L2Q9Y586 359 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 CTTNBP2Q8WZ74 1663 aa4.73□□□□□ -1.65
USP54-206ENST00000433394 TRAV9-2A0A087WT02 112 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 SPAG6O75602 509 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 GJB5O95377 273 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 ALPIP09923 528 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 H2BFMP0C1H6 154 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 CT45A10P0DMU9 189 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 ZNF44P15621 663 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 PGCP20142 388 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 NT5EP21589 574 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 IL24Q13007 206 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 GANABQ14697 944 aaKnown RBP4.72□□□□□ -1.65
USP54-206ENST00000433394 SYPL1Q16563 259 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 EXOC3L2Q2M3D2 409 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 SNAI3Q3KNW1 292 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 ACSM5Q6NUN0 579 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 REG3GQ6UW15 175 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 SERINC5Q86VE9 423 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 ANKFN1Q8N957 763 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 Q8N9G6 341 aaPredicted RBP4.72□□□□□ -1.65
USP54-206ENST00000433394 OR10A7Q8NGE5 316 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 OR6T1Q8NGN1 323 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 NANPQ8TBE9 248 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 AGAP11Q8TF27 550 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 ZNF606Q8WXB4 792 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 OSTF1Q92882 214 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 TMEM80Q96HE8 168 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 PPP1R16AQ96I34 528 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 OR5B2Q96R09 309 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 APOL2Q9BQE5 337 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 VCX2Q9H322 139 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 RHOJQ9H4E5 214 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 ZNF446Q9NWS9 450 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 CHRNA9Q9UGM1 479 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 XPO7Q9UIA9 1087 aaKnown RBP4.72□□□□□ -1.65
USP54-206ENST00000433394 OARD1Q9Y530 152 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 SLCO1B1Q9Y6L6 691 aa4.72□□□□□ -1.65
USP54-206ENST00000433394 E9PLD3 99 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 UGT2B17O75795 530 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 XRCC1P18887 633 aaPredicted RBP4.71□□□□□ -1.66
USP54-206ENST00000433394 SERPINA2P20848 420 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 CHIT1Q13231 466 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 SERTAD2Q14140 314 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 SLC22A6Q4U2R8 563 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 CEP55Q53EZ4 464 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 METTL11BQ5VVY1 283 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 FAHD2BQ6P2I3 314 aaPredicted RBP4.71□□□□□ -1.66
USP54-206ENST00000433394 KCNIP4Q6PIL6 250 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 CYS1Q717R9 158 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 FGFRL1Q8N441 504 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 DHRSXQ8N5I4 330 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 C15orf54Q8N8G6 183 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 MAIP1Q8WWC4 291 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 FAHD2AQ96GK7 314 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 TMEM121Q9BTD3 319 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 GNB4Q9HAV0 340 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 SMPD3Q9NY59 655 aaPredicted RBP4.71□□□□□ -1.66
USP54-206ENST00000433394 ZNF581Q9P0T4 197 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 CEP162Q5TB80 1403 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 ATP10DQ9P241 1426 aa4.71□□□□□ -1.66
USP54-206ENST00000433394 AQRO60306 1485 aaKnown RBP eCLIP4.7□□□□□ -1.66
USP54-206ENST00000433394 ZSCAN5BA6NJL1 495 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 MSH4O15457 936 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 GPAA1O43292 621 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 SRPX2O60687 465 aaPredicted RBP4.7□□□□□ -1.66
USP54-206ENST00000433394 IGF1P05019 195 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 CD55P08174 381 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 IQCF3P0C7M6 154 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 PGAM2P15259 253 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 ACADSP16219 412 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 BCL3P20749 454 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 PAX7P23759 505 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 SHC1P29353 583 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 PTGER3P43115 390 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 ALDH3B2P48448 385 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 CEBPDP49716 269 aaPredicted RBP4.7□□□□□ -1.66
USP54-206ENST00000433394 ZFP36L1Q07352 338 aaKnown RBP4.7□□□□□ -1.66
USP54-206ENST00000433394 CD47Q08722 323 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 FGL1Q08830 312 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 NDUFA9Q16795 377 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 FILIP1LQ4L180 1135 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 C2orf66Q6UXQ4 117 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 STAC2Q6ZMT1 411 aa4.7□□□□□ -1.66
USP54-206ENST00000433394 CCDC80Q76M96 950 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms