RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 FAM110BQ8TC76 370 aa13.28□□□□□ -0.28
PRKDC-203ENST00000432581 OSTF1Q92882 214 aa13.28□□□□□ -0.28
PRKDC-203ENST00000432581 FBXW5Q969U6 566 aa13.28□□□□□ -0.28
PRKDC-203ENST00000432581 S100PBPQ96BU1 408 aa13.28□□□□□ -0.28
PRKDC-203ENST00000432581 ZBED6CLQ96FA7 236 aaPredicted RBP13.28□□□□□ -0.28
PRKDC-203ENST00000432581 REXO5Q96IC2 774 aaKnown RBP13.28□□□□□ -0.28
PRKDC-203ENST00000432581 KLHL15Q96M94 604 aa13.28□□□□□ -0.28
PRKDC-203ENST00000432581 MS4A4EQ96PG1 132 aa13.28□□□□□ -0.28
PRKDC-203ENST00000432581 USB1Q9BQ65 265 aaKnown RBP13.28□□□□□ -0.28
PRKDC-203ENST00000432581 C12orf49Q9H741 205 aa13.28□□□□□ -0.28
PRKDC-203ENST00000432581 TMEM185BQ9H7F4 350 aa13.28□□□□□ -0.28
PRKDC-203ENST00000432581 TIGARQ9NQ88 270 aa13.28□□□□□ -0.28
PRKDC-203ENST00000432581 UBQLN4Q9NRR5 601 aa13.28□□□□□ -0.28
PRKDC-203ENST00000432581 NTMQ9P121 344 aa13.28□□□□□ -0.28
PRKDC-203ENST00000432581 DCDC2Q9UHG0 476 aa13.28□□□□□ -0.28
PRKDC-203ENST00000432581 GOLGA8RI6L899 631 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 OVOL3O00110 214 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 SCDO00767 359 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 SEC22BO75396 215 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 URI1O94763 535 aaPredicted RBP13.27□□□□□ -0.29
PRKDC-203ENST00000432581 KCNK2O95069 426 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 HSPA4LO95757 839 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 MYL2P10916 166 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 NID1P14543 1247 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 PRPH2P23942 346 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 ELK4P28324 431 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 IDUAP35475 653 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 SERPINB4P48594 390 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 PRKAG1P54619 331 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 MANFP55145 182 aaKnown RBP13.27□□□□□ -0.29
PRKDC-203ENST00000432581 KRTAP1-1Q07627 177 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 RNPS1Q15287 305 aaKnown RBP13.27□□□□□ -0.29
PRKDC-203ENST00000432581 ZNF239Q16600 458 aaKnown RBP13.27□□□□□ -0.29
PRKDC-203ENST00000432581 TMEM201Q5SNT2 666 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 ZCCHC12Q6PEW1 402 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 ZYG11AQ6WRX3 759 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 FRMD7Q6ZUT3 714 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 TRMT10CQ7L0Y3 403 aaKnown RBP13.27□□□□□ -0.29
PRKDC-203ENST00000432581 LILRA2Q8N149 483 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 NOA1Q8NC60 698 aaKnown RBP13.27□□□□□ -0.29
PRKDC-203ENST00000432581 MNS1Q8NEH6 495 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 RAB3IL1Q8TBN0 382 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 RNF128Q8TEB7 428 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 HSD17B8Q92506 261 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 CPNE4Q96A23 557 aaPredicted RBP13.27□□□□□ -0.29
PRKDC-203ENST00000432581 SH3YL1Q96HL8 342 aaPredicted RBP13.27□□□□□ -0.29
PRKDC-203ENST00000432581 EGLN2Q96KS0 407 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 NPAS1Q99742 590 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 ESRP2Q9H6T0 727 aaKnown RBP13.27□□□□□ -0.29
PRKDC-203ENST00000432581 GP6Q9HCN6 339 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 CCL27Q9Y4X3 112 aa13.27□□□□□ -0.29
PRKDC-203ENST00000432581 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRKDC-203ENST00000432581 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 A0A1W2PQD3 144 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 GJE1A6NN92 205 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 RNF223E7ERA6 249 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 NPIPB8E9PQR5 432 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 G3V2L1 256 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 CLOCKO15516 846 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 TBX19O60806 448 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 GCM2O75603 506 aaPredicted RBP13.26□□□□□ -0.29
PRKDC-203ENST00000432581 TP53P04637 393 aaPredicted RBP13.26□□□□□ -0.29
PRKDC-203ENST00000432581 FESP07332 822 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 CD3EP07766 207 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 UROSP10746 265 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 ACP2P11117 423 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 PYGBP11216 843 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 IL32P24001 234 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 KIAA0040Q15053 153 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 CFAP157Q5JU67 520 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 NCMAPQ5T1S8 102 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 ALKBH2Q6NS38 261 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 FIGNL1Q6PIW4 674 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 TFAP2EQ6VUC0 442 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 SZRD1Q7Z422 152 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 GABRG1Q8N1C3 465 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 COX18Q8N8Q8 333 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 B4GALNT2Q8NHY0 566 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 POC1BQ8TC44 478 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 ABHD3Q8WU67 409 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 ROBO4Q8WZ75 1007 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 GTPBP3Q969Y2 492 aaKnown RBP13.26□□□□□ -0.29
PRKDC-203ENST00000432581 CIDECQ96AQ7 238 aaPredicted RBP13.26□□□□□ -0.29
PRKDC-203ENST00000432581 PPCDCQ96CD2 204 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 GIMAP5Q96F15 307 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 CCT7Q99832 543 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 REG4Q9BYZ8 158 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 REEP4Q9H6H4 257 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 LRTM1Q9HBL6 345 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 ACSS1Q9NUB1 689 aaPredicted RBP13.26□□□□□ -0.29
PRKDC-203ENST00000432581 FBXO34Q9NWN3 711 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 KLHL13Q9P2N7 655 aa13.26□□□□□ -0.29
PRKDC-203ENST00000432581 PSMC3IPQ9P2W1 217 aaPredicted RBP13.26□□□□□ -0.29
PRKDC-203ENST00000432581 FBN1P35555 2871 aaKnown RBP13.25□□□□□ -0.29
PRKDC-203ENST00000432581 SLC28A1O00337 649 aa13.25□□□□□ -0.29
PRKDC-203ENST00000432581 RIPK2O43353 540 aa13.25□□□□□ -0.29
PRKDC-203ENST00000432581 RGS14O43566 566 aa13.25□□□□□ -0.29
PRKDC-203ENST00000432581 SOD3P08294 240 aa13.25□□□□□ -0.29
PRKDC-203ENST00000432581 ALOX5P09917 674 aa13.25□□□□□ -0.29
PRKDC-203ENST00000432581 LINGO3P0C6S8 592 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 519.3 ms