RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 SUPT7LO94864 414 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 OR4F21O95013 312 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 NKX2-2O95096 273 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 ANGPTL1O95841 491 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 CD3EP07766 207 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 IL3P08700 152 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 SNRPAP09012 282 aaKnown RBP7.4□□□□□ -1.22
CDH13-203ENST00000431540 ANXA4P09525 319 aaPredicted RBP7.4□□□□□ -1.22
CDH13-203ENST00000431540 PRPS2P11908 318 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 NID1P14543 1247 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 ME2P23368 584 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 ATP5F1P24539 256 aaPredicted RBP7.4□□□□□ -1.22
CDH13-203ENST00000431540 PSMA4P25789 261 aaKnown RBP7.4□□□□□ -1.22
CDH13-203ENST00000431540 HMOX2P30519 316 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 CLDN20P56880 219 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 RAE1P78406 368 aaKnown RBP7.4□□□□□ -1.22
CDH13-203ENST00000431540 DUSP2Q05923 314 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 LCP2Q13094 533 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 TNK1Q13470 666 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 SLC29A2Q14542 456 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 CLEC12BQ2HXU8 276 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 ZNF678Q5SXM1 525 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 SFRP5Q5T4F7 317 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 OR5M10Q6IEU7 315 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 FAM71E1Q6IPT2 247 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 C22orf34Q6ZV56 151 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 GPRIN3Q6ZVF9 776 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.4□□□□□ -1.22
CDH13-203ENST00000431540 CCDC25Q86WR0 208 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 TDRPQ86YL5 185 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 CDRT4Q8N9R6 151 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 OR9A2Q8NGT5 310 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 DCAKDQ8WVC6 231 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 OIT3Q8WWZ8 545 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 KAT2AQ92830 837 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 ARL8AQ96BM9 186 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 EFHD2Q96C19 240 aaPredicted RBP7.4□□□□□ -1.22
CDH13-203ENST00000431540 MTERF3Q96E29 417 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 PLPPR2Q96GM1 343 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 REXO5Q96IC2 774 aaKnown RBP7.4□□□□□ -1.22
CDH13-203ENST00000431540 NSUN5Q96P11 429 aaKnown RBP7.4□□□□□ -1.22
CDH13-203ENST00000431540 PFDN4Q9NQP4 134 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 UBQLN4Q9NRR5 601 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 ACSS1Q9NUB1 689 aaPredicted RBP7.4□□□□□ -1.22
CDH13-203ENST00000431540 LPAR3Q9UBY5 353 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 ADAM21Q9UKJ8 722 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 MGAT4BQ9UQ53 548 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 RNF115Q9Y4L5 304 aa7.4□□□□□ -1.22
CDH13-203ENST00000431540 UQCRHLA0A096LP55 91 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 A8MT66 165 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 ESPNB1AK53 854 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 B4DXG7 233 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 H3BML4 177 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 NDUFB5O43674 189 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 AQP8O94778 261 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 PRKD3O94806 890 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 YES1P07947 543 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 SBK3P0C264 359 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 ARAFP10398 606 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 NTSP30990 170 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 FRKP42685 505 aaPredicted RBP7.39□□□□□ -1.23
CDH13-203ENST00000431540 PRKAA2P54646 552 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 SUMO3P55854 103 aaPredicted RBP7.39□□□□□ -1.23
CDH13-203ENST00000431540 CARD18P57730 90 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 KRTAP1-1Q07627 177 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 C2orf80Q0P641 193 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 ITGADQ13349 1161 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 MLC1Q15049 377 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 LTB4RQ15722 352 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 CTU2Q2VPK5 515 aaKnown RBP7.39□□□□□ -1.23
CDH13-203ENST00000431540 GLE1Q53GS7 698 aaKnown RBP7.39□□□□□ -1.23
CDH13-203ENST00000431540 SGO1Q5FBB7 561 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 TMEM201Q5SNT2 666 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 AP1ARQ63HQ0 302 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 HMBOX1Q6NT76 420 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 ZNF550Q7Z398 422 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 DTX2Q86UW9 622 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 UBQLNLQ8IYU4 475 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 GABRG1Q8N1C3 465 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 CDYL2Q8N8U2 506 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 OR4N2Q8NGD1 307 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 OR10D3Q8NH80 312 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 ZFP28Q8NHY6 868 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 PIWIL2Q8TC59 973 aaKnown RBP7.39□□□□□ -1.23
CDH13-203ENST00000431540 SMAP2Q8WU79 429 aaPredicted RBP7.39□□□□□ -1.23
CDH13-203ENST00000431540 AKAP1Q92667 903 aaKnown RBP eCLIP7.39□□□□□ -1.23
CDH13-203ENST00000431540 EXOSC8Q96B26 276 aaKnown RBP7.39□□□□□ -1.23
CDH13-203ENST00000431540 AMDHD1Q96NU7 426 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 ACPTQ9BZG2 426 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 ACTR6Q9GZN1 396 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 MIEF1Q9NQG6 463 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 RRAGDQ9NQL2 400 aaPredicted RBP7.39□□□□□ -1.23
CDH13-203ENST00000431540 DDX18Q9NVP1 670 aaKnown RBP7.39□□□□□ -1.23
CDH13-203ENST00000431540 DCDC2Q9UHG0 476 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 CDC42EP3Q9UKI2 254 aa7.39□□□□□ -1.23
CDH13-203ENST00000431540 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.39□□□□□ -1.23
CDH13-203ENST00000431540 ARFGEF3Q5TH69 2177 aa7.38□□□□□ -1.23
CDH13-203ENST00000431540 MALRD1Q5VYJ5 2156 aa7.38□□□□□ -1.23
CDH13-203ENST00000431540 A0A087WUV0 522 aaPredicted RBP7.38□□□□□ -1.23
CDH13-203ENST00000431540 ELOA3DA6NLF2 546 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms