RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ANKRD26P1Q6NSI1 321 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 C6orf120Q7Z4R8 191 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 ARFGAP2Q8N6H7 521 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 METTL25Q8N6Q8 603 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 FAM71CQ8NEG0 241 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 OR4C3Q8NH37 302 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 OR14L1PQ8NHC6 308 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 CKAP2Q8WWK9 683 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 SLC9A6Q92581 669 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 ARL8AQ96BM9 186 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 SDCCAG3Q96C92 435 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 RMND5BQ96G75 393 aaPredicted RBP8.28□□□□□ -1.08
SMC1A-203ENST00000428014 TRNT1Q96Q11 434 aaKnown RBP8.28□□□□□ -1.08
SMC1A-203ENST00000428014 SDF2Q99470 211 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 PAIP2Q9BPZ3 127 aaKnown RBP8.28□□□□□ -1.08
SMC1A-203ENST00000428014 SFXN3Q9BWM7 321 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 SLC6A15Q9H2J7 730 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 PIGMQ9H3S5 423 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 RAD21L1Q9H4I0 556 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 RMND5AQ9H871 391 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 SERHLQ9NQF3 203 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 EXOSC3Q9NQT5 275 aaKnown RBP8.28□□□□□ -1.08
SMC1A-203ENST00000428014 GLRX2Q9NS18 164 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 INTS9Q9NV88 658 aaKnown RBP8.28□□□□□ -1.08
SMC1A-203ENST00000428014 CALML5Q9NZT1 146 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 JKAMPQ9P055 326 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 CLCF1Q9UBD9 225 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 KCNN3Q9UGI6 736 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 SLC35A3Q9Y2D2 325 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 DTNAQ9Y4J8 743 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 GPC6Q9Y625 555 aaPredicted RBP8.28□□□□□ -1.08
SMC1A-203ENST00000428014 USH1CQ9Y6N9 552 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 NCKAP5O14513 1909 aa8.28□□□□□ -1.08
SMC1A-203ENST00000428014 DOCK7Q96N67 2140 aa8.27□□□□□ -1.08
SMC1A-203ENST00000428014 CACNA1DQ01668 2161 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 CREBBPQ92793 2442 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 RNF103-CHMP3A0A140T963 221 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 FAM234BA2RU67 622 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 ADAMDEC1O15204 470 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 UBDO15205 165 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 PDE9AO76083 593 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 ZIC2O95409 532 aaPredicted RBP8.27□□□□□ -1.09
SMC1A-203ENST00000428014 IGKV1D-16P01601 117 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 BMP2P12643 396 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 IL11P20809 199 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 CTSSP25774 331 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 PSMA4P25789 261 aaKnown RBP8.27□□□□□ -1.09
SMC1A-203ENST00000428014 EPHA3P29320 983 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 KHKP50053 298 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 P2RX1P51575 399 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 PRKAG1P54619 331 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 RPS3AP61247 264 aaKnown RBP8.27□□□□□ -1.09
SMC1A-203ENST00000428014 PHC1P78364 1004 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 PMPCAQ10713 525 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 FADDQ13158 208 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 GNA13Q14344 377 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 GRAMD1BQ3KR37 738 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 SPDYE7PQ495Y7 208 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 EIPR1Q53HC9 387 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 TTMPQ5BVD1 217 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 SPANXN4Q5MJ08 99 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 WIPI1Q5MNZ9 446 aaPredicted RBP8.27□□□□□ -1.09
SMC1A-203ENST00000428014 C1QTNF12Q5T7M4 302 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 OR4F3Q6IEY1 312 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 ZNF585AQ6P3V2 769 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 ESPNLQ6ZVH7 1005 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 SEM1Q6ZVN7 128 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 GDF7Q7Z4P5 450 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 ANKRD46Q86W74 232 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 MIER2Q8N344 545 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 MEIOBQ8N635 442 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 DUSP19Q8WTR2 217 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 ST8SIA1Q92185 356 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 MRGPRX4Q96LA9 322 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 SFXN2Q96NB2 322 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 OR7D2Q96RA2 312 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 EVA1AQ9H8M9 152 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 MED4Q9NPJ6 270 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 TCF7L2Q9NQB0 619 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 GIMAP2Q9UG22 337 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 DKKL1Q9UK85 242 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 FBXL2Q9UKC9 423 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 ICAM5Q9UMF0 924 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 SNX8Q9Y5X2 465 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 CRYBG3Q68DQ2 2970 aa8.27□□□□□ -1.09
SMC1A-203ENST00000428014 UTP20O75691 2785 aaKnown RBP8.27□□□□□ -1.09
SMC1A-203ENST00000428014 HCFC1P51610 2035 aa8.26□□□□□ -1.09
SMC1A-203ENST00000428014 A0A0G2JNJ9 132 aa8.26□□□□□ -1.09
SMC1A-203ENST00000428014 GXYLT2A0PJZ3 443 aa8.26□□□□□ -1.09
SMC1A-203ENST00000428014 GJE1A6NN92 205 aa8.26□□□□□ -1.09
SMC1A-203ENST00000428014 POLR3GO15318 223 aaPredicted RBP8.26□□□□□ -1.09
SMC1A-203ENST00000428014 CFLARO15519 480 aa8.26□□□□□ -1.09
SMC1A-203ENST00000428014 KIAA0513O60268 411 aa8.26□□□□□ -1.09
SMC1A-203ENST00000428014 NTN1O95631 604 aa8.26□□□□□ -1.09
SMC1A-203ENST00000428014 LINGO3P0C6S8 592 aa8.26□□□□□ -1.09
SMC1A-203ENST00000428014 PABPC4LP0CB38 370 aaKnown RBP8.26□□□□□ -1.09
SMC1A-203ENST00000428014 COX6B1P14854 86 aa8.26□□□□□ -1.09
SMC1A-203ENST00000428014 MATN1P21941 496 aa8.26□□□□□ -1.09
SMC1A-203ENST00000428014 PPIBP23284 216 aaKnown RBP8.26□□□□□ -1.09
SMC1A-203ENST00000428014 ADSLP30566 484 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms