RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 RAB21Q9UL25 225 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 FAF1Q9UNN5 650 aaPredicted RBP16.56■□□□□ 0.24
PSPC1-202ENST00000427943 PLEKHA6Q9Y2H5 1048 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 AP4B1Q9Y6B7 739 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 KCNE3Q9Y6H6 103 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 HEATR5AQ86XA9 2040 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 SH3D21A4FU49 640 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 A8MXE2 369 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 TM9SF1O15321 606 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 BIRC5O15392 142 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 OPN1LWP04000 364 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 CRHP06850 196 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 DHRS4L1P0CG22 281 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 ZNF17P17021 662 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 ATP6V1C1P21283 382 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 BGNP21810 368 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 LCN1P31025 176 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 KIR2DL2P43627 348 aaPredicted RBP16.55■□□□□ 0.24
PSPC1-202ENST00000427943 RPS3AP61247 264 aaKnown RBP16.55■□□□□ 0.24
PSPC1-202ENST00000427943 HBA1P69905 142 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 EMX2Q04743 252 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 MPP2Q14168 576 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 POU4F3Q15319 338 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 SGCBQ16585 318 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 DCST2Q5T1A1 773 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 BTLAQ7Z6A9 289 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 CLECL1Q8IZS7 167 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 NATD1Q8N6N6 113 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 SFXN5Q8TD22 340 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 STARD4Q96DR4 205 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 RNF145Q96MT1 663 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 SORT1Q99523 831 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 OPN3Q9H1Y3 402 aaPredicted RBP16.55■□□□□ 0.24
PSPC1-202ENST00000427943 TMEM185BQ9H7F4 350 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 RNF122Q9H9V4 155 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 NEUROD4Q9HD90 331 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 KCNK9Q9NPC2 374 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 MED17Q9NVC6 651 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 RAP2CQ9Y3L5 183 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 ZNF175Q9Y473 711 aa16.55■□□□□ 0.24
PSPC1-202ENST00000427943 A0A087WZY1 265 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 A0A1W2PQD3 144 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 MSTNO14793 375 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 OIP5O43482 229 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 AQP8O94778 261 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 MYZAPP0CAP1 466 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 EIF1AXP47813 144 aaKnown RBP16.54■□□□□ 0.24
PSPC1-202ENST00000427943 SLC1A6P48664 564 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 CLDN8P56748 225 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 RPS26P62854 115 aaKnown RBP16.54■□□□□ 0.24
PSPC1-202ENST00000427943 EEF1A1P68104 462 aaKnown RBP16.54■□□□□ 0.24
PSPC1-202ENST00000427943 ZNF117Q03924 483 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 EEF1A1P5Q5VTE0 462 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 OR4F3Q6IEY1 312 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 MISPQ8IVT2 679 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 CLEC4FQ8N1N0 589 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 OR5D16Q8NGK9 328 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 B4GALNT2Q8NHY0 566 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 PHOSPHO1Q8TCT1 267 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 PGM2Q96G03 612 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 OR7D2Q96RA2 312 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 AKTIPQ9H8T0 292 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 ASIC5Q9NY37 505 aa16.54■□□□□ 0.24
PSPC1-202ENST00000427943 PRRC2AP48634 2157 aaKnown RBP16.54■□□□□ 0.24
PSPC1-202ENST00000427943 KRT16P08779 473 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 CD1EP15812 388 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 SLC6A8P48029 635 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 C21orf58P58505 322 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 FAM27E3Q08E93 113 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 NDUFAF6Q330K2 333 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 TNFAIP8L3Q5GJ75 292 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.53■□□□□ 0.24
PSPC1-202ENST00000427943 CAMKMTQ7Z624 323 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 GTPBP8Q8N3Z3 284 aaPredicted RBP16.53■□□□□ 0.24
PSPC1-202ENST00000427943 ZNF614Q8N883 585 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 ANKRD42Q8N9B4 389 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 OR10D3Q8NH80 312 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 POC1BQ8TC44 478 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 NINJ1Q92982 152 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 ZBTB8AQ96BR9 441 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 MOAP1Q96BY2 351 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 PAIP2Q9BPZ3 127 aaKnown RBP16.53■□□□□ 0.24
PSPC1-202ENST00000427943 SERHL2Q9H4I8 314 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 HHATLQ9HCP6 504 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 ITPR3Q14573 2671 aa16.53■□□□□ 0.24
PSPC1-202ENST00000427943 CXCL13O43927 109 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 FCGR2AP12318 317 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 PSMA4P25789 261 aaKnown RBP16.52■□□□□ 0.24
PSPC1-202ENST00000427943 RPL14P50914 215 aaKnown RBP16.52■□□□□ 0.24
PSPC1-202ENST00000427943 FOXF1Q12946 379 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 SMU1Q2TAY7 513 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 CTU2Q2VPK5 515 aaKnown RBP16.52■□□□□ 0.24
PSPC1-202ENST00000427943 ZNF474Q6S9Z5 364 aaPredicted RBP16.52■□□□□ 0.24
PSPC1-202ENST00000427943 CBLN3Q6UW01 205 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 WDR75Q8IWA0 830 aaKnown RBP16.52■□□□□ 0.24
PSPC1-202ENST00000427943 ZNF527Q8NB42 609 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 ACTRT2Q8TDY3 377 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 ADGRG7Q96K78 797 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 SLC35G5Q96KT7 338 aa16.52■□□□□ 0.24
PSPC1-202ENST00000427943 DACH2Q96NX9 599 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms