RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 CYB561P49447 251 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 PUM1Q14671 1186 aaKnown RBP eCLIP9.98□□□□□ -0.816e-7■■■□□ 15.6
TCOF1-204ENST00000427724 SLC14A2Q15849 920 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 RSPO4Q2I0M5 234 aaPredicted RBP9.98□□□□□ -0.81
TCOF1-204ENST00000427724 SHQ1Q6PI26 577 aaKnown RBP9.98□□□□□ -0.81
TCOF1-204ENST00000427724 WDR53Q7Z5U6 358 aaPredicted RBP9.98□□□□□ -0.81
TCOF1-204ENST00000427724 WDR5BQ86VZ2 330 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 IQCF2Q8IXL9 164 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 OR5P2Q8WZ92 322 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 MMP28Q9H239 520 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 MAGIXQ9H6Y5 334 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 GPR83Q9NYM4 423 aa9.98□□□□□ -0.81
TCOF1-204ENST00000427724 DIDO1Q9BTC0 2240 aaKnown RBP9.98□□□□□ -0.81
TCOF1-204ENST00000427724 RGPD4Q7Z3J3 1758 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 ALOX12BO75342 701 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 HSD3B1P14060 373 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 PGCP20142 388 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 HIST1H1TP22492 207 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-204ENST00000427724 HSD3B2P26439 372 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 CAPZBP47756 277 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 UBE2NP61088 152 aaKnown RBP9.97□□□□□ -0.81
TCOF1-204ENST00000427724 C6orf120Q7Z4R8 191 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 TMEM105Q8N8V8 129 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 FAM83FQ8NEG4 500 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-204ENST00000427724 ADAMTS16Q8TE57 1224 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 TANKQ92844 425 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 PNPLA2Q96AD5 504 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 MRGPRX3Q96LB0 322 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 WASHC1A8K0Z3 465 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 ANHXE9PGG2 379 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 PRRG2O14669 202 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 DNAJB5O75953 348 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 CH25HO95992 272 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 CKMT1AP12532 417 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 IMPA1P29218 277 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 RORCP51449 518 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 ADARB1P78563 741 aaKnown RBP9.97□□□□□ -0.81
TCOF1-204ENST00000427724 WASH2PQ6VEQ5 465 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 Q6ZPB1 254 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-204ENST00000427724 LAPTM4BQ86VI4 370 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 GEMIN6Q8WXD5 167 aaKnown RBP9.97□□□□□ -0.81
TCOF1-204ENST00000427724 RDH8Q9NYR8 311 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 NUDT21O43809 227 aaKnown RBP9.97□□□□□ -0.81
TCOF1-204ENST00000427724 SOX30O94993 753 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 PRKACAP17612 351 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 CR2P20023 1033 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 SSR4P51571 173 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 SELENBP1Q13228 472 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 CRTC2Q53ET0 693 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-204ENST00000427724 PRAMEF17Q5VTA0 474 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 BICRALQ6AI39 1079 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 ZNF585AQ6P3V2 769 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 DHRS4L2Q6PKH6 230 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 BHLHA9Q7RTU4 235 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 FGD2Q7Z6J4 655 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 TSPYL5Q86VY4 417 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-204ENST00000427724 METTL4Q8N3J2 472 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 AP3S1Q92572 193 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 ZNF775Q96BV0 537 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-204ENST00000427724 UCK2Q9BZX2 261 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 CDCP1Q9H5V8 836 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 PLEKHA1Q9HB21 404 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 SPTBP11277 2137 aa9.97□□□□□ -0.81
TCOF1-204ENST00000427724 FAM166BA8MTA8 275 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 C21orf33P30042 268 aaPredicted RBP9.96□□□□□ -0.81
TCOF1-204ENST00000427724 GRHL2Q6ISB3 625 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 SBSNQ6UWP8 590 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 RPTNQ6XPR3 784 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 ASB18Q6ZVZ8 466 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 OR9A2Q8NGT5 310 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 MCHR1Q99705 422 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 DOPEY2Q9Y3R5 2298 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 A0A1W2PQF6 199 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 AGAP5A6NIR3 686 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 KLRC4-KLRK1H3BQV0 150 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 RNF13O43567 381 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 MPZL2O60487 215 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 APOL3O95236 402 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 H1F0P07305 194 aaKnown RBP9.96□□□□□ -0.81
TCOF1-204ENST00000427724 CELA2BP08218 269 aaPredicted RBP9.96□□□□□ -0.81
TCOF1-204ENST00000427724 SLC2A2P11168 524 aaPredicted RBP9.96□□□□□ -0.81
TCOF1-204ENST00000427724 CD1CP29017 333 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 PIK3CBP42338 1070 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 SIRPAP78324 504 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 BCL7AQ4VC05 210 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 CCDC58Q4VC31 144 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 ARSJQ5FYB0 599 aaPredicted RBP9.96□□□□□ -0.81
TCOF1-204ENST00000427724 ATAD3CQ5T2N8 411 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 DLEU7Q6UYE1 221 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 FAM83HQ6ZRV2 1179 aaPredicted RBP9.96□□□□□ -0.81
TCOF1-204ENST00000427724 RFPL4BQ6ZWI9 263 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 FAM217AQ8IXS0 508 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 SLC37A3Q8NCC5 494 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 MOSPD2Q8NHP6 518 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 AKAP1Q92667 903 aaKnown RBP eCLIP9.96□□□□□ -0.81
TCOF1-204ENST00000427724 C11orf24Q96F05 449 aaPredicted RBP9.96□□□□□ -0.81
TCOF1-204ENST00000427724 MENTQ9BUN1 341 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 SLITRK2Q9H156 845 aa9.96□□□□□ -0.81
TCOF1-204ENST00000427724 EIF3KQ9UBQ5 218 aaKnown RBP9.96□□□□□ -0.81
TCOF1-204ENST00000427724 MCTS1Q9ULC4 181 aaKnown RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms