RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 CDSNQ15517 529 aa16.33■□□□□ 0.2
HERC3-205ENST00000426683 ZNF630Q2M218 657 aaPredicted RBP16.33■□□□□ 0.2
HERC3-205ENST00000426683 ACSF3Q4G176 576 aaPredicted RBP16.33■□□□□ 0.2
HERC3-205ENST00000426683 COX20Q5RI15 118 aa16.33■□□□□ 0.2
HERC3-205ENST00000426683 ARSKQ6UWY0 536 aa16.33■□□□□ 0.2
HERC3-205ENST00000426683 OR10Q1Q8NGQ4 319 aa16.33■□□□□ 0.2
HERC3-205ENST00000426683 B4GALNT2Q8NHY0 566 aa16.33■□□□□ 0.2
HERC3-205ENST00000426683 GTF2H4Q92759 462 aa16.33■□□□□ 0.2
HERC3-205ENST00000426683 TMEM120AQ9BXJ8 343 aa16.33■□□□□ 0.2
HERC3-205ENST00000426683 NMUR2Q9GZQ4 415 aa16.33■□□□□ 0.2
HERC3-205ENST00000426683 RABEP2Q9H5N1 569 aa16.33■□□□□ 0.2
HERC3-205ENST00000426683 TMEM45AQ9NWC5 275 aa16.33■□□□□ 0.2
HERC3-205ENST00000426683 RNF6Q9Y252 685 aa16.33■□□□□ 0.2
HERC3-205ENST00000426683 VDAC3Q9Y277 283 aa16.33■□□□□ 0.2
HERC3-205ENST00000426683 WDR45Q9Y484 360 aa16.33■□□□□ 0.2
HERC3-205ENST00000426683 PRAMEF27A3QJZ7 478 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 PRSS44E7EML9 344 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 H0Y3Z8 333 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 HCRTR2O43614 444 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 TNFRSF21O75509 655 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 CLDN14O95500 239 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 CAPN3P20807 821 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 COL8A1P27658 744 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 MDH1P40925 334 aaKnown RBP16.32■□□□□ 0.2
HERC3-205ENST00000426683 LHX2P50458 406 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 HPCAP84074 193 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 ZNF117Q03924 483 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 SF3A3Q12874 501 aaKnown RBP eCLIP16.32■□□□□ 0.2
HERC3-205ENST00000426683 SF3B4Q15427 424 aaKnown RBP eCLIP16.32■□□□□ 0.2
HERC3-205ENST00000426683 GLYR1Q49A26 553 aaPredicted RBP16.32■□□□□ 0.2
HERC3-205ENST00000426683 GPAT3Q53EU6 434 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 DOPEY1Q5JWR5 2465 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 PDZK1Q5T2W1 519 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 TYW3Q6IPR3 259 aaKnown RBP16.32■□□□□ 0.2
HERC3-205ENST00000426683 CCDC71Q8IV32 467 aaPredicted RBP16.32■□□□□ 0.2
HERC3-205ENST00000426683 CA5BP1Q8WTZ4 195 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 ASB5Q8WWX0 329 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 AURKBQ96GD4 344 aaPredicted RBP16.32■□□□□ 0.2
HERC3-205ENST00000426683 TRIB1Q96RU8 372 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 PIGQQ9BRB3 760 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 DIDO1Q9BTC0 2240 aaKnown RBP16.32■□□□□ 0.2
HERC3-205ENST00000426683 PAIP1Q9H074 479 aaKnown RBP16.32■□□□□ 0.2
HERC3-205ENST00000426683 ZNF385DQ9H6B1 395 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 CCDC134Q9H6E4 229 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 TPT1P8Q9HAU6 139 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 POLE3Q9NRF9 147 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 KCNE5Q9UJ90 142 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 CARD8Q9Y2G2 431 aa16.32■□□□□ 0.2
HERC3-205ENST00000426683 A0A087WZY1 265 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 CENPVL1A0A0U1RR11 272 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 OR2M5A3KFT3 312 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 SERINC4A6NH21 518 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 KDM4EB2RXH2 506 aaPredicted RBP16.31■□□□□ 0.2
HERC3-205ENST00000426683 SHISA8B8ZZ34 492 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 FAM47E-STBD1D6RA91 191 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 GTPBP1O00178 669 aaKnown RBP16.31■□□□□ 0.2
HERC3-205ENST00000426683 OIP5O43482 229 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 KIAA0513O60268 411 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 UGT2B17O75795 530 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 EPPINO95925 133 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 GUSBP08236 651 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 CD1EP15812 388 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 ZNF708P17019 499 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 POU3F2P20265 443 aaPredicted RBP16.31■□□□□ 0.2
HERC3-205ENST00000426683 ARFIP2P53365 341 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 CLDN18P56856 261 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 ZNF141Q15928 474 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 SYPL1Q16563 259 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 NDUFAF6Q330K2 333 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 CGB2Q6NT52 195 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 FRRS1Q6ZNA5 592 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 SEM1Q6ZVN7 128 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 ZNF619Q8N2I2 560 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 ANKFN1Q8N957 763 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 ZPLD1Q8TCW7 415 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 KLHDC3Q9BQ90 382 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 SLC52A3Q9NQ40 469 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 MED17Q9NVC6 651 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 LIPT1Q9Y234 373 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 ZNF337Q9Y3M9 751 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 PCDHB14Q9Y5E9 798 aa16.31■□□□□ 0.2
HERC3-205ENST00000426683 KLF2Q9Y5W3 355 aaPredicted RBP16.31■□□□□ 0.2
HERC3-205ENST00000426683 A0A096LPI6 279 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 A0A0G2JNJ9 132 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 H3BML4 177 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 LINC01387J3KSC0 135 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 H6PDO95479 791 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 UBL4AP11441 157 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 PEPDP12955 493 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 HTR1EP28566 365 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 CHRNB4P30926 498 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 ADH7P40394 386 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 CRATP43155 626 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 MAGEA8P43361 318 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 P2RX1P51575 399 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 ZNF41P51814 821 aaPredicted RBP16.3■□□□□ 0.2
HERC3-205ENST00000426683 MVDP53602 400 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 CHRNEQ04844 493 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 BCL2A1Q16548 175 aa16.3■□□□□ 0.2
HERC3-205ENST00000426683 TMEM44Q2T9K0 475 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms