RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 LINC01387J3KSC0 135 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 SCDO00767 359 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 ZNF195O14628 629 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 TNFSF13O75888 250 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 SOX30O94993 753 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 UQCRC1P31930 480 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 RNF144AP50876 292 aaPredicted RBP16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 CASP9P55211 416 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 CBLN3Q6UW01 205 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 OLIG3Q7RTU3 272 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 GGNQ86UU5 652 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 GCNT2Q8N0V5 402 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 OR4A15Q8NGL6 344 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 RAB3IL1Q8TBN0 382 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 ACTRT2Q8TDY3 377 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 FIG4Q92562 907 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 ZNF524Q96C55 264 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 SH3YL1Q96HL8 342 aaPredicted RBP16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 ZNF845Q96IR2 970 aaPredicted RBP16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 MAELQ96JY0 434 aaKnown RBP16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 MED17Q9NVC6 651 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 NKIRAS1Q9NYS0 192 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 KCNE5Q9UJ90 142 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 AP4B1Q9Y6B7 739 aa16.52■□□□□ 0.24
SMARCAL1-205ENST00000425815 A0A087WZY1 265 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 RNF103-CHMP3A0A140T963 221 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 C9JVG2 144 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 FCMRO60667 390 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 TNFRSF21O75509 655 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 CPSF4O95639 269 aaKnown RBP16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 KRT16P08779 473 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 HPGDP15428 266 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 SOAT1P35610 550 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 ATP12AP54707 1039 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 PLPPR5Q32ZL2 321 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 AGBL2Q5U5Z8 902 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 ANXA8L1Q5VT79 327 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 ATG16L1Q676U5 607 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 SPATA19Q7Z5L4 167 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 GRAMD2AQ8IUY3 354 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 MISPQ8IVT2 679 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 GTPBP8Q8N3Z3 284 aaPredicted RBP16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 MEIOBQ8N635 442 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 CHDHQ8NE62 594 aaPredicted RBP16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 B4GALNT2Q8NHY0 566 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 MIPOL1Q8TD10 442 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 ZNF75CPQ92670 426 aaPredicted RBP16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 ADGRG7Q96K78 797 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 ZFP3Q96NJ6 502 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 ZNF559Q9BR84 538 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 SFXN3Q9BWM7 321 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 HOXD1Q9GZZ0 328 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 CRIM1Q9NZV1 1036 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 ARHGAP21Q5T5U3 1957 aa16.51■□□□□ 0.23
SMARCAL1-205ENST00000425815 C7orf72A4D263 438 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 E9PBE3 544 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 KLF11O14901 512 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 SEC14L5O43304 696 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 EFNA2O43921 213 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 LINGO3P0C6S8 592 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 CAPN3P20807 821 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 IL11P20809 199 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 ATP6V1C1P21283 382 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 UQCRC2P22695 453 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 KIR2DL3P43628 341 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 CLNS1AP54105 237 aaKnown RBP16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 ZNF117Q03924 483 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 FAM174BQ3ZCQ3 159 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 FLYWCH1Q4VC44 716 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 SLC9B1Q4ZJI4 515 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 SAXO2Q658L1 398 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 BHLHB9Q6PI77 547 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 METTL25Q8N6Q8 603 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 PHOSPHO1Q8TCT1 267 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 STARD4Q96DR4 205 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 ICAM5Q9UMF0 924 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 CREBBPQ92793 2442 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 PCNX3Q9H6A9 2034 aa16.5■□□□□ 0.23
SMARCAL1-205ENST00000425815 MYO9AB2RTY4 2548 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 CENPVL1A0A0U1RR11 272 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 A0A1W2PNV4 684 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 PRAMEF27A3QJZ7 478 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 FAM221AA4D161 298 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 SLC22A20A6NK97 555 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 TRPC5OSA6NMA1 111 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 EEF1E1-BLOC1S5C9J1V9 151 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 EEF1E1O43324 174 aaKnown RBP16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 OPN1LWP04000 364 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 ZNF17P17021 662 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 S100A3P33764 101 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 KIR2DL2P43627 348 aaPredicted RBP16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 EEFSECP57772 596 aaKnown RBP16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 MYBPHQ13203 477 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 CTU2Q2VPK5 515 aaKnown RBP16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 NDUFAF6Q330K2 333 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 ARHGAP11BQ3KRB8 267 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 AP1ARQ63HQ0 302 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 HEPHL1Q6MZM0 1159 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 CHMP1BQ7LBR1 199 aa16.49■□□□□ 0.23
SMARCAL1-205ENST00000425815 MTERF4Q7Z6M4 381 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms