RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 AK6Q9Y3D8 172 aaKnown RBP10.56□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 AGAP14A8MT82 685 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 RNF13O43567 381 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 SLC28A2O43868 658 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 SSX5O60225 188 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 EIF3GO75821 320 aaKnown RBP eCLIP10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 SLC16A8O95907 504 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 IL3P08700 152 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 CYBAP13498 195 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 AKR1A1P14550 325 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 S100A11P31949 105 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 MAPK9P45984 424 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 CRYBB1P53674 252 aaPredicted RBP10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 SSTP61278 116 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 DHODHQ02127 395 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 NOGQ13253 232 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF177Q13360 481 aaPredicted RBP10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 GDF6Q6KF10 455 aaPredicted RBP10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 CERS6Q6ZMG9 384 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 NXPE1Q8N323 547 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 OXR1Q8N573 874 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF485Q8NCK3 441 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 TEX47Q8TBZ9 253 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 UBTD2Q8WUN7 234 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 NEIL2Q969S2 332 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 RDH14Q9HBH5 336 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 MIEF1Q9NQG6 463 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 EXOSC3Q9NQT5 275 aaKnown RBP10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 TRPC4Q9UBN4 977 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 GULP1Q9UBP9 304 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 KCND3Q9UK17 655 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 A4GNTQ9UNA3 340 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 SCML2Q9UQR0 700 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 ANTXRLA6NF34 631 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 TTLL8A6PVC2 850 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 RNASET2O00584 256 aaKnown RBP10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 PGRMC2O15173 223 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 KDELR3O43731 214 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 DUSP11O75319 330 aaKnown RBP10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 STATHP02808 62 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 SLC6A12P48065 614 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 FLT3LGP49771 235 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 LRRC37A5PQ49AS3 106 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 PIP5KL1Q5T9C9 394 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 SLC36A4Q6YBV0 504 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 LRRC70Q7Z2Q7 622 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 CHST14Q8NCH0 376 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 OR10H4Q8NGA5 316 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 ASB11Q8WXH4 323 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 OR51I1Q9H343 314 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 REEP4Q9H6H4 257 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 FKRPQ9H9S5 495 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 EPHA6Q9UF33 1036 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 PCDHGA5Q9Y5G8 931 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 AP1M2Q9Y6Q5 423 aa10.55□□□□□ -0.72
SEC61A1-202ENST00000424880 ANKRD61A6NGH8 418 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 NPIPB15A6NHN6 443 aaPredicted RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 OR6C65A6NJZ3 312 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 H7C0S8 307 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 ECDO95905 644 aaPredicted RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 ARAFP10398 606 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 C4BPBP20851 252 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 PPIBP23284 216 aaKnown RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 TIA1P31483 386 aaKnown RBP eCLIP10.54□□□□□ -0.729e-9■■■■□ 23.3
SEC61A1-202ENST00000424880 TM4SF4P48230 202 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 H2BFSP57053 126 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 CNTN1Q12860 1018 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 ATXN7L3Q14CW9 347 aaPredicted RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF630Q2M218 657 aaPredicted RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 PAN3Q58A45 887 aaKnown RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 DCAF12L2Q5VW00 463 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 HAGHLQ6PII5 290 aaPredicted RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 GSG1LQ6UXU4 331 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 BTN2A1Q7KYR7 527 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 C11orf96Q7Z7L8 435 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 CPOQ8IVL8 374 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 KLHL36Q8N4N3 616 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 OR56B4Q8NH76 319 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 SCAMP4Q969E2 229 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 DERL3Q96Q80 235 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 GAS2L1Q99501 681 aaPredicted RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 TREX2Q9BQ50 279 aaPredicted RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 MAGEH1Q9H213 219 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 TMEM231Q9H6L2 316 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 WBP1LQ9NX94 342 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 COL4A4P53420 1690 aaPredicted RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 FAAHO00519 579 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 FABP1P07148 127 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 ATF1P18846 271 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 RBMS1P29558 406 aaKnown RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 CD52P31358 61 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 CCR8P51685 355 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 HECTD3Q5T447 861 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF660Q6AZW8 331 aaPredicted RBP10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 SEZ6L2Q6UXD5 910 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 MACC1Q6ZN28 852 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 TMEM99Q8N816 258 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 SCARB1Q8WTV0 552 aa10.54□□□□□ -0.72
SEC61A1-202ENST00000424880 NSMAFQ92636 917 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms