RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 NEURL3Q96EH8 262 aa9.92□□□□□ -0.82
USP49-204ENST00000423567 C1GALT1C1Q96EU7 318 aa9.92□□□□□ -0.82
USP49-204ENST00000423567 MARK4Q96L34 752 aa9.92□□□□□ -0.82
USP49-204ENST00000423567 TEX37Q96LM6 180 aa9.92□□□□□ -0.82
USP49-204ENST00000423567 OR51I1Q9H343 314 aa9.92□□□□□ -0.82
USP49-204ENST00000423567 CALHM2Q9HA72 323 aa9.92□□□□□ -0.82
USP49-204ENST00000423567 SLCO1B3Q9NPD5 702 aa9.92□□□□□ -0.82
USP49-204ENST00000423567 SDR39U1Q9NRG7 319 aaPredicted RBP9.92□□□□□ -0.82
USP49-204ENST00000423567 FBXO34Q9NWN3 711 aa9.92□□□□□ -0.82
USP49-204ENST00000423567 KCNE3Q9Y6H6 103 aa9.92□□□□□ -0.82
USP49-204ENST00000423567 GTF3C1Q12789 2109 aa9.92□□□□□ -0.82
USP49-204ENST00000423567 EXPH5Q8NEV8 1989 aa9.92□□□□□ -0.82
USP49-204ENST00000423567 A0A0G2JNJ9 132 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 CCDC154A6NI56 674 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 CD8B2A6NJW9 211 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 GTPBP1O00178 669 aaKnown RBP9.91□□□□□ -0.82
USP49-204ENST00000423567 RFXANKO14593 260 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 DVL2O14641 736 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 HCRTR2O43614 444 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 KRT75O95678 551 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 OR12D1P0DN82 309 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 ZNF708P17019 499 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 GRNP28799 593 aaKnown RBP9.91□□□□□ -0.82
USP49-204ENST00000423567 IL12AP29459 219 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 TIMP3P35625 211 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 STARP49675 285 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 LHX2P50458 406 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 POLR2JP52435 117 aaKnown RBP9.91□□□□□ -0.82
USP49-204ENST00000423567 ATP12AP54707 1039 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 BCL2A1Q16548 175 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 SLC25A35Q3KQZ1 300 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 SAXO2Q658L1 398 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 TNFAIP8L2Q6P589 184 aaPredicted RBP9.91□□□□□ -0.82
USP49-204ENST00000423567 MSANTD1Q6ZTZ1 278 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 ARFGAP2Q8N6H7 521 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 CHDHQ8NE62 594 aaPredicted RBP9.91□□□□□ -0.82
USP49-204ENST00000423567 B4GALNT2Q8NHY0 566 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 MIPOL1Q8TD10 442 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 XAGE5Q8WWM1 108 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 LRRC46Q96FV0 321 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 SH3YL1Q96HL8 342 aaPredicted RBP9.91□□□□□ -0.82
USP49-204ENST00000423567 SDF2Q99470 211 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 TM9SF2Q99805 663 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 CCDC28BQ9BUN5 200 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 RTN4RQ9BZR6 473 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 Q9UFV3 132 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 VDAC3Q9Y277 283 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 DTNAQ9Y4J8 743 aa9.91□□□□□ -0.82
USP49-204ENST00000423567 DNAJC13O75165 2243 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 NPIPA5A0A0B4J1W7 369 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 FAM234BA2RU67 622 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 OR2M5A3KFT3 312 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 NKX2-6A6NCS4 301 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 NPIPA7E9PJI5 369 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 H3BML4 177 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 NUDT14O95848 222 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 SNRPB2P08579 225 aaKnown RBP9.9□□□□□ -0.82
USP49-204ENST00000423567 NPIPA8P0DM63 369 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 ZNF17P17021 662 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 ADH7P40394 386 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 IDH3AP50213 366 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 CASP9P55211 416 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 CLDN18P56856 261 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 RPS3AP61247 264 aaKnown RBP9.9□□□□□ -0.82
USP49-204ENST00000423567 IRX1P78414 480 aaPredicted RBP9.9□□□□□ -0.82
USP49-204ENST00000423567 CDSNQ15517 529 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 GPR68Q15743 365 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 ARHGAP11BQ3KRB8 267 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 TIGD2Q4W5G0 525 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 C6orf10Q5SRN2 563 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 ARSKQ6UWY0 536 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 P4HA3Q7Z4N8 544 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 RNF130Q86XS8 419 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 UBQLNLQ8IYU4 475 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 TNIP2Q8NFZ5 429 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 ZBTB8AQ96BR9 441 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 ITCHQ96J02 903 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 TUBA1CQ9BQE3 449 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 SIKE1Q9BRV8 207 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 UCK2Q9BZX2 261 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 NMUR2Q9GZQ4 415 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 SERHL2Q9H4I8 314 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 POLE3Q9NRF9 147 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 AP4B1Q9Y6B7 739 aa9.9□□□□□ -0.82
USP49-204ENST00000423567 MBD3L4A6NDZ8 208 aaPredicted RBP9.89□□□□□ -0.83
USP49-204ENST00000423567 MBD3L3A6NE82 208 aaPredicted RBP9.89□□□□□ -0.83
USP49-204ENST00000423567 MBD3L5A6NJ08 208 aaPredicted RBP9.89□□□□□ -0.83
USP49-204ENST00000423567 CLCA1A8K7I4 914 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 B4DXG7 233 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 SEC14L5O43304 696 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 GSNP06396 782 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 UBL4AP11441 157 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 BMP5P22003 454 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 ME2P23368 584 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 CEACAM8P31997 349 aaPredicted RBP9.89□□□□□ -0.83
USP49-204ENST00000423567 OPRM1P35372 400 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 EIF1P41567 113 aaKnown RBP9.89□□□□□ -0.83
USP49-204ENST00000423567 MAGEA8P43361 318 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 P2RX1P51575 399 aa9.89□□□□□ -0.83
USP49-204ENST00000423567 CCR4P51679 360 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms