RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 SLC22A20A6NK97 555 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 ALG1L2C9J202 215 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 OXSR1O95747 527 aaPredicted RBP13.69□□□□□ -0.22
USB1-202ENST00000423271 CPA2P48052 419 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 IST1P53990 364 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 CLDN20P56880 219 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 C17orf67Q0P5P2 114 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 DAZAP2Q15038 168 aaPredicted RBP13.69□□□□□ -0.22
USB1-202ENST00000423271 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.69□□□□□ -0.22
USB1-202ENST00000423271 CCNJQ5T5M9 372 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 NXNQ6DKJ4 435 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 CDC20BQ86Y33 519 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 RIMKLAQ8IXN7 391 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 MEIOBQ8N635 442 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 COX18Q8N8Q8 333 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 FAM110BQ8TC76 370 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 SMPDL3BQ92485 455 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 JADE3Q92613 823 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 ZNF845Q96IR2 970 aaPredicted RBP13.69□□□□□ -0.22
USB1-202ENST00000423271 OR52B2Q96RD2 323 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 KLHDC3Q9BQ90 382 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 PIGQQ9BRB3 760 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 PINK1Q9BXM7 581 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 ZCCHC3Q9NUD5 404 aaKnown RBP13.69□□□□□ -0.22
USB1-202ENST00000423271 PACSIN3Q9UKS6 424 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 VDAC3Q9Y277 283 aa13.69□□□□□ -0.22
USB1-202ENST00000423271 C2CD3Q4AC94 2353 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 A0A1W2PRB8 838 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 EDF1O60869 148 aaKnown RBP13.68□□□□□ -0.22
USB1-202ENST00000423271 DIAPH2O60879 1101 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 HMGN2P05204 90 aaKnown RBP13.68□□□□□ -0.22
USB1-202ENST00000423271 ALOX5P09917 674 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 EPXP11678 715 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 PRPS1L1P21108 318 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 CPOXP36551 454 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 CLDN8P56748 225 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 GUCY1A3Q02108 690 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 LASP1Q14847 261 aaKnown RBP13.68□□□□□ -0.22
USB1-202ENST00000423271 MLC1Q15049 377 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 TMEM44Q2T9K0 475 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 VWA1Q6PCB0 445 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 EPGNQ6UW88 154 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 CHMP1BQ7LBR1 199 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 SPATA19Q7Z5L4 167 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 ACTRT2Q8TDY3 377 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 NPAS1Q99742 590 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 PIGMQ9H3S5 423 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 CXorf36Q9H7Y0 433 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 AIG1Q9NVV5 245 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 ST6GALNAC2Q9UJ37 374 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 SNX8Q9Y5X2 465 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 ZFHX3Q15911 3703 aa13.68□□□□□ -0.22
USB1-202ENST00000423271 VPS13CQ709C8 3753 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 MAP1AP78559 2803 aaPredicted RBP13.67□□□□□ -0.22
USB1-202ENST00000423271 A8MXE2 369 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 NDUFB5O43674 189 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 C6orf47O95873 294 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 NGFRP08138 427 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 TBXA2RP21731 343 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 RPL3P39023 403 aaKnown RBP13.67□□□□□ -0.22
USB1-202ENST00000423271 PRIM2P49643 509 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 IDH3AP50213 366 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 AQP5P55064 265 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 SIRPAP78324 504 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 POU6F2P78424 691 aaPredicted RBP13.67□□□□□ -0.22
USB1-202ENST00000423271 LSM12Q3MHD2 195 aaKnown RBP13.67□□□□□ -0.22
USB1-202ENST00000423271 GLYR1Q49A26 553 aaPredicted RBP13.67□□□□□ -0.22
USB1-202ENST00000423271 CPTPQ5TA50 214 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 CNEP1R1Q8N9A8 125 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 GOT1L1Q8NHS2 421 aaPredicted RBP13.67□□□□□ -0.22
USB1-202ENST00000423271 FNDC9Q8TBE3 224 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 CDS1Q92903 461 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 STARD4Q96DR4 205 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 THOC1Q96FV9 657 aaKnown RBP13.67□□□□□ -0.22
USB1-202ENST00000423271 CHMP6Q96FZ7 201 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 SH3YL1Q96HL8 342 aaPredicted RBP13.67□□□□□ -0.22
USB1-202ENST00000423271 MARK4Q96L34 752 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 DPY30Q9C005 99 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 CCM2LQ9NUG4 571 aaPredicted RBP13.67□□□□□ -0.22
USB1-202ENST00000423271 PLEKHA6Q9Y2H5 1048 aa13.67□□□□□ -0.22
USB1-202ENST00000423271 NPIPA5A0A0B4J1W7 369 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 NPIPA7E9PJI5 369 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 LINC01387J3KSC0 135 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 ANKRD28O15084 1053 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 TNFRSF21O75509 655 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 SMNDC1O75940 238 aaKnown RBP eCLIP13.66□□□□□ -0.222e-6■■■■□ 22.6
USB1-202ENST00000423271 TGDSO95455 350 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 NPIPA8P0DM63 369 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 DDX5P17844 614 aaKnown RBP13.66□□□□□ -0.22
USB1-202ENST00000423271 KIR2DL2P43627 348 aaPredicted RBP13.66□□□□□ -0.22
USB1-202ENST00000423271 RNF144AP50876 292 aaPredicted RBP13.66□□□□□ -0.22
USB1-202ENST00000423271 NME5P56597 212 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 EEFSECP57772 596 aaKnown RBP13.66□□□□□ -0.22
USB1-202ENST00000423271 C21orf58P58505 322 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 TP53BP2Q13625 1128 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 PON3Q15166 354 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 POU4F3Q15319 338 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 CD226Q15762 336 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 OR2A2Q6IF42 318 aa13.66□□□□□ -0.22
USB1-202ENST00000423271 CDC73Q6P1J9 531 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms