RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 SLC26A1Q9H2B4 701 aa19.35■□□□□ 0.69
GPC1-202ENST00000420138 ANKRD19PQ9H560 264 aa19.35■□□□□ 0.69
GPC1-202ENST00000420138 NINQ8N4C6 2090 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 SLC1A7O00341 560 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 ADAM11O75078 769 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 TP53P04637 393 aaPredicted RBP19.34■□□□□ 0.69
GPC1-202ENST00000420138 MMP11P24347 488 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 PCSK6P29122 969 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 GGT2P36268 569 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 ATP12AP54707 1039 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 FAAH2Q6GMR7 532 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 C1orf94Q6P1W5 598 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 PLEKHM3Q6ZWE6 761 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 ANKRD37Q7Z713 158 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 GRAMD2AQ8IUY3 354 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 NKAIN4Q8IVV8 208 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 ZNF420Q8TAQ5 688 aaPredicted RBP19.34■□□□□ 0.69
GPC1-202ENST00000420138 SLC41A3Q96GZ6 507 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 CDC6Q99741 560 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 UCK2Q9BZX2 261 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 FBXO8Q9NRD0 319 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 DNAJB12Q9NXW2 375 aaKnown RBP19.34■□□□□ 0.69
GPC1-202ENST00000420138 CFL2Q9Y281 166 aa19.34■□□□□ 0.69
GPC1-202ENST00000420138 IGHV3-20A0A0C4DH32 117 aa19.33■□□□□ 0.69
GPC1-202ENST00000420138 FRG2CA6NGY1 282 aa19.33■□□□□ 0.69
GPC1-202ENST00000420138 LYPD3O95274 346 aa19.33■□□□□ 0.69
GPC1-202ENST00000420138 TGM1P22735 817 aa19.33■□□□□ 0.69
GPC1-202ENST00000420138 CHMP24386 653 aa19.33■□□□□ 0.69
GPC1-202ENST00000420138 CCKBRP32239 447 aa19.33■□□□□ 0.69
GPC1-202ENST00000420138 FGFBP1Q14512 234 aa19.33■□□□□ 0.69
GPC1-202ENST00000420138 MAD2L1BPQ15013 274 aaPredicted RBP19.33■□□□□ 0.69
GPC1-202ENST00000420138 MRPL14Q6P1L8 145 aaKnown RBP19.33■□□□□ 0.69
GPC1-202ENST00000420138 LSRQ86X29 649 aaPredicted RBP19.33■□□□□ 0.69
GPC1-202ENST00000420138 ENTHD1Q8IYW4 607 aa19.33■□□□□ 0.69
GPC1-202ENST00000420138 ARSGQ96EG1 525 aa19.33■□□□□ 0.69
GPC1-202ENST00000420138 LCORQ96JN0 433 aaPredicted RBP19.33■□□□□ 0.69
GPC1-202ENST00000420138 SYNDIG1LA6NDD5 238 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 FMO6PO60774 539 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 CPNE3O75131 537 aaKnown RBP19.32■□□□□ 0.68
GPC1-202ENST00000420138 DCKP27707 260 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 TARDBPQ13148 414 aaKnown RBP eCLIP19.32■□□□□ 0.68
GPC1-202ENST00000420138 PTGES3Q15185 160 aaKnown RBP19.32■□□□□ 0.68
GPC1-202ENST00000420138 CD300LDQ6UXZ3 194 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 RANBP3LQ86VV4 465 aaPredicted RBP19.32■□□□□ 0.68
GPC1-202ENST00000420138 SPARTQ8N0X7 666 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 LINC00471Q8N535 108 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 APH1BQ8WW43 257 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 SGCDQ92629 289 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 SLC38A4Q969I6 547 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 EFHD2Q96C19 240 aaPredicted RBP19.32■□□□□ 0.68
GPC1-202ENST00000420138 ART5Q96L15 291 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 PRSS27Q9BQR3 290 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 FLRT3Q9NZU0 649 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 ZAR1LA6NP61 321 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 ALOX12BO75342 701 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 ANGPTL1O95841 491 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 IGFBP1P08833 259 aaPredicted RBP19.32■□□□□ 0.68
GPC1-202ENST00000420138 OSMP13725 252 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 ACAA2P42765 397 aaKnown RBP19.32■□□□□ 0.68
GPC1-202ENST00000420138 CRISP1P54107 249 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 UGT2B15P54855 530 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 CXCR4P61073 352 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 ZNF614Q8N883 585 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 ZNF441Q8N8Z8 693 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 NFAM1Q8NET5 270 aaPredicted RBP19.32■□□□□ 0.68
GPC1-202ENST00000420138 BPIFB6Q8NFQ5 453 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 POLR2J2Q9GZM3 115 aaKnown RBP19.32■□□□□ 0.68
GPC1-202ENST00000420138 POLR2J3Q9H1A7 115 aaKnown RBP19.32■□□□□ 0.68
GPC1-202ENST00000420138 ZNF223Q9UK11 482 aaPredicted RBP19.32■□□□□ 0.68
GPC1-202ENST00000420138 RNF6Q9Y252 685 aa19.32■□□□□ 0.68
GPC1-202ENST00000420138 C2orf92A0A1B0GVN3 265 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 WBP4O75554 376 aaKnown RBP19.31■□□□□ 0.68
GPC1-202ENST00000420138 IL33O95760 270 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 HEXBP07686 556 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 GSSP48637 474 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 NUP107P57740 925 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 ILKQ13418 452 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 TUBA3CQ13748 450 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 OR1Q1Q15612 314 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 DECR1Q16698 335 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 KLHL26Q53HC5 615 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 GPR107Q5VW38 600 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 XAF1Q6GPH4 301 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 PRICKLE2Q7Z3G6 844 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 SLCO6A1Q86UG4 719 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 OR13F1Q8NGS4 319 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 C12orf43Q96C57 262 aaKnown RBP19.31■□□□□ 0.68
GPC1-202ENST00000420138 DOK1Q99704 481 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 WDR77Q9BQA1 342 aaPredicted RBP19.31■□□□□ 0.68
GPC1-202ENST00000420138 NRSN2Q9GZP1 204 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 WWTR1Q9GZV5 400 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 ARMC7Q9H6L4 198 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 EVA1AQ9H8M9 152 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.31■□□□□ 0.68
GPC1-202ENST00000420138 TESQ9UGI8 421 aaKnown RBP19.31■□□□□ 0.68
GPC1-202ENST00000420138 SLC7A7Q9UM01 511 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 SNX5Q9Y5X3 404 aa19.31■□□□□ 0.68
GPC1-202ENST00000420138 TO15178 435 aa19.3■□□□□ 0.68
GPC1-202ENST00000420138 FOXD2O60548 495 aaPredicted RBP19.3■□□□□ 0.68
GPC1-202ENST00000420138 RFPL3O75679 317 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms