RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 SPIN4Q56A73 249 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 GTF2IRD2BQ6EKJ0 949 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 C11orf71Q6IPW1 123 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 CLEC2AQ6UVW9 174 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 ZDHHC24Q6UX98 284 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 GTF2IRD2Q86UP8 949 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 CCDC25Q86WR0 208 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 BANPQ8N9N5 519 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 POC1BQ8TC44 478 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 ACTRT2Q8TDY3 377 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 SLC9A6Q92581 669 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 HOXB13Q92826 284 aaPredicted RBP9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 MRRFQ96E11 262 aaKnown RBP9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 APIPQ96GX9 242 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 KLHL15Q96M94 604 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 BBS4Q96RK4 519 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 KLHDC3Q9BQ90 382 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 TMEM185BQ9H7F4 350 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 GP6Q9HCN6 339 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 MED17Q9NVC6 651 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 DDX18Q9NVP1 670 aaKnown RBP9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 FAIMQ9NVQ4 179 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 CISD1Q9NZ45 108 aaKnown RBP9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 RNF14Q9UBS8 474 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 DMGDHQ9UI17 866 aaKnown RBP9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 CADP27708 2225 aa9.05□□□□□ -0.96
TNFAIP3-202ENST00000420009 GOLGA8QA0A0J9YX86 632 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 GXYLT2A0PJZ3 443 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 GOLGA8OA6NCC3 632 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 ZNF814B7Z6K7 855 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 GOLGA8NF8WBI6 632 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 GOLGA8RI6L899 631 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 NTN1O95631 604 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 OXSR1O95747 527 aaPredicted RBP9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 KRT6AP02538 564 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 KRT6BP04259 564 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 SBK3P0C264 359 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 PABPC4LP0CB38 370 aaKnown RBP9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 ZNF16P17020 682 aaPredicted RBP9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 ME2P23368 584 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 SHC1P29353 583 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 HSD17B3P37058 310 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 MAP3K8P41279 467 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 RFX3P48380 749 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 KRT6CP48668 564 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 HTR6P50406 440 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 NCBP2P52298 156 aaKnown RBP eCLIP9.04□□□□□ -0.967e-14■■□□□ 14.3
TNFAIP3-202ENST00000420009 CDH11P55287 796 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 C21orf58P58505 322 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 SRSF2Q01130 221 aaKnown RBP9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 CAV1Q03135 178 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 SLC18A2Q05940 514 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 ACSM2AQ08AH3 577 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 ZNF763Q0D2J5 394 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 ITGADQ13349 1161 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 RASA2Q15283 850 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 TSNAXIP1Q2TAA8 658 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 TMEM201Q5SNT2 666 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 CPTPQ5TA50 214 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 ACSM2BQ68CK6 577 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 BHLHA15Q7RTS1 189 aaPredicted RBP9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 TRABD2AQ86V40 505 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 TMEM151AQ8N4L1 468 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 CDYL2Q8N8U2 506 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 OR4C3Q8NH37 302 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 ROBO4Q8WZ75 1007 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 OSTF1Q92882 214 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 CPNE4Q96A23 557 aaPredicted RBP9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 ELP4Q96EB1 424 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 ADAD1Q96M93 576 aaKnown RBP9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 AMDHD1Q96NU7 426 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 CACNG6Q9BXT2 260 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 EBPLQ9BY08 206 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 SRXN1Q9BYN0 137 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 SHARPINQ9H0F6 387 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 MRPL46Q9H2W6 279 aaKnown RBP9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 GLIPR2Q9H4G4 154 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 HHATLQ9HCP6 504 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 SIRT5Q9NXA8 310 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 TAS2R7Q9NYW3 318 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 GRID1Q9ULK0 1009 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 NFU1Q9UMS0 254 aa9.04□□□□□ -0.96
TNFAIP3-202ENST00000420009 TTC36A6NLP5 189 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 NDUFB5O43674 189 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 KCNH1O95259 989 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 ADAP00813 363 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 LINGO3P0C6S8 592 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 IGHV4-31P0DP07 118 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 COL6A2P12110 1019 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 SLC25A16P16260 332 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 COX5AP20674 150 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 PTNP21246 168 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 IGFBP5P24593 272 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 ELK4P28324 431 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 GABRA3P34903 492 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 ZNF41P51814 821 aaPredicted RBP9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 CARD18P57730 90 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 CLCQ05315 142 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 SLC29A2Q14542 456 aa9.03□□□□□ -0.96
TNFAIP3-202ENST00000420009 UAP1Q16222 522 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms