RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 OR52N1Q8NH53 320 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 FANK1Q8TC84 345 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 LMX1AQ8TE12 382 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 RNFT2Q96EX2 444 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MAP3K3Q99759 626 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PRSS27Q9BQR3 290 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 HOXD1Q9GZZ0 328 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CTPS2Q9NRF8 586 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SIDT1Q9NXL6 827 aaKnown RBP13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 H2AFY2Q9P0M6 372 aaPredicted RBP13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ZNF223Q9UK11 482 aaPredicted RBP13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CORINQ9Y5Q5 1042 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CEP192Q8TEP8 1941 aa13.49□□□□□ -0.25
HLA-DPA1-242ENST00000419277 A0A0B4J2E0 115 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 A0A1B0GX12 115 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 KRBA1A5PL33 1030 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 FOXS1O43638 330 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 HCN1O60741 890 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 IL1AP01583 271 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 IGHA1P01876 353 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 IGFBP1P08833 259 aaPredicted RBP13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 BMP4P12644 408 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GNSP15586 552 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 S1PR1P21453 382 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 EMDP50402 254 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PPP1CAP62136 330 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SNRPNP63162 240 aaKnown RBP13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GPLD1P80108 840 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ID2Q02363 134 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TPBGQ13641 420 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 FGFBP1Q14512 234 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OXA1LQ15070 435 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SSX1Q16384 188 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TRIM16LQ309B1 348 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 LAPTM4BQ86VI4 370 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 LNX2Q8N448 690 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 DRAXINQ8NBI3 349 aaPredicted RBP13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TMEM255BQ8WV15 326 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PIK3R3Q92569 461 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 UFD1Q92890 307 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TPSD1Q9BZJ3 242 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OR51E2Q9H255 320 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ERVMER34-1Q9H9K5 563 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 EXOGQ9Y2C4 368 aaKnown RBP13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SLC35A3Q9Y2D2 325 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MN1Q10571 1320 aaPredicted RBP13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 XIRP2A4UGR9 3374 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 THADAQ6YHU6 1953 aa13.48□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SLC22A31A6NKX4 558 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 J3QRK9 145 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 NUDT21O43809 227 aaKnown RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 FOXD2O60548 495 aaPredicted RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 THY1P04216 161 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 WNT1P04628 370 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CT62P0C5K7 136 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PAICSP22234 425 aaKnown RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GABRA5P31644 462 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GPR143P51810 404 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 RPL6Q02878 288 aaKnown RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 RUNX1T1Q06455 604 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GPR50Q13585 617 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 UBXN2BQ14CS0 331 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 EXOSC7Q15024 291 aaKnown RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MAPK14Q16539 360 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SPANXN2Q5MJ10 180 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CCNJQ5T5M9 372 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 WDR53Q7Z5U6 358 aaPredicted RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PLXDC1Q8IUK5 500 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PHC2Q8IXK0 858 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CENPSQ8N2Z9 138 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 DNAJA4Q8WW22 397 aaPredicted RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CENPOQ9BU64 300 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MED18Q9BUE0 208 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CDADC1Q9BWV3 514 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SLC19A3Q9BZV2 496 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 OR52D1Q9H346 318 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SOHLH2Q9NX45 425 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 MRTO4Q9UKD2 239 aaKnown RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 NUP210LQ5VU65 1888 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SZT2Q5T011 3432 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 A0A0A6YYC8 382 aaPredicted RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 IQCMA0A1B0GVH7 501 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 LOC110117498-PIK3R3F6TDL0 507 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 NPIPB9F8W1W9 429 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 I3L1I5 382 aaPredicted RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SLC30A4O14863 429 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 POLR1CO15160 346 aaPredicted RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 DNAJB6O75190 326 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 HBQ1P09105 142 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TSPAN19P0C672 248 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CFL1P23528 166 aaKnown RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 HTR2AP28223 471 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GPR4P46093 362 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SLC9A3P48764 834 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 RORCP51449 518 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ATP12AP54707 1039 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GAS1P54826 345 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 POU4F2Q12837 409 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 FOXD4Q12950 439 aaPredicted RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ITGADQ13349 1161 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms