RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 BBIP1A8MTZ0 92 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 FXYD1O00168 92 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 PRRG2O14669 202 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 MRASO14807 208 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 SLC22A2O15244 555 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 HCRTR2O43614 444 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 CCDC22O60826 627 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 UGT2B17O75795 530 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 AGFG2O95081 481 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 PPIBP23284 216 aaKnown RBP11.33□□□□□ -0.6
SKA1-203ENST00000417656 ADSLP30566 484 aaPredicted RBP11.33□□□□□ -0.6
SKA1-203ENST00000417656 CASP6P55212 293 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 DSCR4P56555 118 aaPredicted RBP11.33□□□□□ -0.6
SKA1-203ENST00000417656 MTPNP58546 118 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 CRYZQ08257 329 aaKnown RBP11.33□□□□□ -0.6
SKA1-203ENST00000417656 FADDQ13158 208 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 SELPLGQ14242 412 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 GANABQ14697 944 aaKnown RBP11.33□□□□□ -0.6
SKA1-203ENST00000417656 ZNF141Q15928 474 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 MAPK14Q16539 360 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 ZNF630Q2M218 657 aaPredicted RBP11.33□□□□□ -0.6
SKA1-203ENST00000417656 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.33□□□□□ -0.6
SKA1-203ENST00000417656 TRMT5Q32P41 509 aaKnown RBP11.33□□□□□ -0.6
SKA1-203ENST00000417656 C4orf17Q53FE4 359 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 RPS26P11Q5JNZ5 115 aaPredicted RBP11.33□□□□□ -0.6
SKA1-203ENST00000417656 DCST1Q5T197 706 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 GCNT6Q5T4J0 391 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 C3P1Q6ZMU1 363 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 MTDHQ86UE4 582 aaKnown RBP11.33□□□□□ -0.6
SKA1-203ENST00000417656 IFNEQ86WN2 208 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 MISPQ8IVT2 679 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 TMCO5AQ8N6Q1 288 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 POU5F2Q8N7G0 328 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 OR5M9Q8NGP3 310 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 MAL2Q969L2 176 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 SARAFQ96BY9 339 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 C1GALT1C1Q96EU7 318 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 DTNBP1Q96EV8 351 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 TMEM19Q96HH6 336 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 CGREF1Q99674 301 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 SLC39A3Q9BRY0 314 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 SAP130Q9H0E3 1048 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 PTGES2Q9H7Z7 377 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 PNPLA3Q9NST1 481 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 SLC5A6Q9Y289 635 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 RPH3AQ9Y2J0 694 aaPredicted RBP11.33□□□□□ -0.6
SKA1-203ENST00000417656 L3MBTL1Q9Y468 752 aa11.33□□□□□ -0.6
SKA1-203ENST00000417656 PCNX3Q9H6A9 2034 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 LOC100653049A0A140TA62 436 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 CLEC18AA5D8T8 446 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 SERINC4A6NH21 518 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 SHISA8B8ZZ34 492 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 H3BNH8 94 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 BCKDKO14874 412 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 LRRTM2O43300 516 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 KRT34O76011 436 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 GUSBP08236 651 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 TFPTP0C1Z6 253 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 RNF224P0DH78 156 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 UBL4AP11441 157 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 BMP2P12643 396 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 HK1P19367 917 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 CCR4P51679 360 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 FGFBP1Q14512 234 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 MMEL1Q495T6 779 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 RUNDC3AQ59EK9 446 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 COQ5Q5HYK3 327 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 EMC4Q5J8M3 183 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 RAET1LQ5VY80 246 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 CBLN3Q6UW01 205 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 ARSKQ6UWY0 536 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 CLEC18BQ6UXF7 455 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 LRRC74BQ6ZQY2 392 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 NCCRP1Q6ZVX7 275 aaPredicted RBP11.32□□□□□ -0.6
SKA1-203ENST00000417656 MTERF4Q7Z6M4 381 aaKnown RBP11.32□□□□□ -0.6
SKA1-203ENST00000417656 DOLPP1Q86YN1 238 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 TREML1Q86YW5 311 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 FAM26EQ8N5C1 309 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 CLEC18CQ8NCF0 446 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 B4GALNT2Q8NHY0 566 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 SLC38A5Q8WUX1 472 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 RCN3Q96D15 328 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 ARSGQ96EG1 525 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 SFXN2Q96NB2 322 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 ANKRD27Q96NW4 1050 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 CCDC106Q9BWC9 280 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 UGT2B28Q9BY64 529 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 MYLK2Q9H1R3 596 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 A4GALTQ9NPC4 353 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 ACAD8Q9UKU7 415 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 CORO2BQ9UQ03 480 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 VDAC3Q9Y277 283 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 CARD8Q9Y2G2 431 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 GMEB1Q9Y692 573 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 DSPPQ9NZW4 1301 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 GTF3C1Q12789 2109 aa11.32□□□□□ -0.6
SKA1-203ENST00000417656 A0A1B0GUH1 482 aa11.31□□□□□ -0.6
SKA1-203ENST00000417656 TMEM247A6NEH6 219 aa11.31□□□□□ -0.6
SKA1-203ENST00000417656 CLDN24A6NM45 220 aa11.31□□□□□ -0.6
SKA1-203ENST00000417656 EVPLLA8MZ36 301 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms