RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 BMI1P35226 326 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 MSX2P35548 267 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 CD79BP40259 229 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 ETV6P41212 452 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 CXCR3P49682 368 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 HLCSP50747 726 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 PRKAA2P54646 552 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 GFERP55789 205 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 RAB25P57735 213 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 GABARAPL2P60520 117 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 ABATP80404 500 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 GTF2BQ00403 316 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 ZNF45Q02386 682 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 GNA12Q03113 381 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 STX4Q12846 297 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 CUL2Q13617 745 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 KCNJ11Q14654 390 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 PON3Q15166 354 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 ELAVL1Q15717 326 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 CYP1B1Q16678 543 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 UGT3A2Q3SY77 523 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 KRTCAP3Q53RY4 240 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 C2CD6Q53TS8 623 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 RABGAP1LQ5R372 815 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 TEDDM1Q5T9Z0 273 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 MANEALQ5VSG8 457 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 LPCAT4Q643R3 524 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 CASC4Q6P4E1 433 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 C22orf39Q6P5X5 142 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 NPSR1Q6W5P4 371 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 SCARA5Q6ZMJ2 495 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 RTL4Q6ZR62 310 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 FAM122BQ7Z309 247 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 TRABD2AQ86V40 505 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 NUDCD3Q8IVD9 361 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 EMC1Q8N766 993 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 OR1M1Q8NGA1 313 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 OR56B2PQ8NGI1 322 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 FAM216AQ8WUB2 273 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 SPSB4Q96A44 273 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 PTERQ96BW5 349 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 TMCO6Q96DC7 493 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 CMTM5Q96DZ9 223 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 MRPL48Q96GC5 212 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 MARS2Q96GW9 593 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 OXNAD1Q96HP4 312 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 CNBD2Q96M20 576 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 KLHL15Q96M94 604 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 CYTH2Q99418 400 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 MESP1Q9BRJ9 268 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 CCDC32Q9BV29 185 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 DUSP26Q9BV47 211 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 CNPPD1Q9BV87 410 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 UCK2Q9BZX2 261 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 TRIM2Q9C040 744 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 DNTTIP1Q9H147 329 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 OPA3Q9H6K4 179 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 LIN28AQ9H9Z2 209 aaKnown RBP5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 MAGEF1Q9HAY2 307 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 SPACA1Q9HBV2 294 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 ZNF275Q9NSD4 429 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 ADPRHL2Q9NX46 363 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 PPP4R1LQ9P1A2 415 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 NFKBIL1Q9UBC1 381 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 CTSFQ9UBX1 484 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 GIMAP2Q9UG22 337 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 ARMCX3Q9UH62 379 aaPredicted RBP5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 SNX6Q9UNH7 406 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 MGAT4BQ9UQ53 548 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 CRYL1Q9Y2S2 319 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 SLC22A7Q9Y694 548 aa5.08□□□□□ -1.6
ECHDC1-206ENST00000417628 KMT2CQ8NEZ4 4911 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 TRAV17A0A0B4J275 112 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 MFSD2BA6NFX1 497 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 GPR89AB7ZAQ6 455 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 I3L521 148 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 CDC7O00311 574 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 STX16O14662 325 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 TSPAN2O60636 221 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 UGT2B11O75310 529 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 SLC22A5O76082 557 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 KCNK2O95069 426 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 GABARAPO95166 117 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 VAPBO95292 243 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 TTC4O95801 387 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 C9P02748 559 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 ENO1P06733 434 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 ACAA1P09110 424 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 QDPRP09417 244 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 GPR89BP0CG08 455 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 APEHP13798 732 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 CTPS1P17812 591 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 MMP8P22894 467 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 PTBP1P26599 531 aaKnown RBP eCLIP5.07□□□□□ -1.65e-10■■■■□ 20.2
ECHDC1-206ENST00000417628 AK4P27144 223 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 PDHA2P29803 388 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 WNT3P56703 355 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 SKP1P63208 163 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 HHEXQ03014 270 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 GLO1Q04760 184 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms