RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 CPA2P48052 419 aa16.07■□□□□ 0.16
CPNE1-210ENST00000416778 ABCE1P61221 599 aaKnown RBP16.07■□□□□ 0.16
CPNE1-210ENST00000416778 CHI3L2Q15782 390 aa16.07■□□□□ 0.16
CPNE1-210ENST00000416778 KLHL26Q53HC5 615 aa16.07■□□□□ 0.16
CPNE1-210ENST00000416778 MISPQ8IVT2 679 aa16.07■□□□□ 0.16
CPNE1-210ENST00000416778 GTPBP8Q8N3Z3 284 aaPredicted RBP16.07■□□□□ 0.16
CPNE1-210ENST00000416778 ZIM3Q96PE6 472 aa16.07■□□□□ 0.16
CPNE1-210ENST00000416778 DUSP26Q9BV47 211 aa16.07■□□□□ 0.16
CPNE1-210ENST00000416778 AKTIPQ9H8T0 292 aa16.07■□□□□ 0.16
CPNE1-210ENST00000416778 PLEKHF2Q9H8W4 249 aa16.07■□□□□ 0.16
CPNE1-210ENST00000416778 MED17Q9NVC6 651 aa16.07■□□□□ 0.16
CPNE1-210ENST00000416778 ASIC5Q9NY37 505 aa16.07■□□□□ 0.16
CPNE1-210ENST00000416778 VDAC3Q9Y277 283 aa16.07■□□□□ 0.16
CPNE1-210ENST00000416778 MED13LQ71F56 2210 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 NUP214P35658 2090 aaPredicted RBP16.06■□□□□ 0.16
CPNE1-210ENST00000416778 C7orf72A4D263 438 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 ADAMDEC1O15204 470 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 AQP8O94778 261 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 HPGDP15428 266 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 RPS3AP61247 264 aaKnown RBP16.06■□□□□ 0.16
CPNE1-210ENST00000416778 RAC1P63000 192 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 MAD2L1Q13257 205 aaPredicted RBP16.06■□□□□ 0.16
CPNE1-210ENST00000416778 PON3Q15166 354 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 GUSBP1Q15486 140 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 CD226Q15762 336 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 CAMKMTQ7Z624 323 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 ZNF781Q8N8C0 355 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 CNEP1R1Q8N9A8 125 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 OR56A1Q8NGH5 318 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 PPP1R14CQ8TAE6 165 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 POC1BQ8TC44 478 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 ADAMTS15Q8TE58 950 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 SMPDL3BQ92485 455 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 JADE3Q92613 823 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 ADGRG7Q96K78 797 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 HOXD1Q9GZZ0 328 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 STOML1Q9UBI4 398 aa16.06■□□□□ 0.16
CPNE1-210ENST00000416778 SH3D21A4FU49 640 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 SCDO00767 359 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 TM9SF1O15321 606 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 EFNA2O43921 213 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 SMNDC1O75940 238 aaKnown RBP eCLIP16.05■□□□□ 0.16
CPNE1-210ENST00000416778 GOSR1O95249 250 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 OPN1LWP04000 364 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 HRGP04196 525 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 ZNF17P17021 662 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 SLC6A8P48029 635 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 SLC1A6P48664 564 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 HBA1P69905 142 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 SGCBQ16585 318 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 CTU2Q2VPK5 515 aaKnown RBP16.05■□□□□ 0.16
CPNE1-210ENST00000416778 PGS1Q32NB8 556 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 PLPPR5Q32ZL2 321 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 WDR75Q8IWA0 830 aaKnown RBP16.05■□□□□ 0.16
CPNE1-210ENST00000416778 ZNF610Q8N9Z0 462 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 B4GALNT2Q8NHY0 566 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 SFXN5Q8TD22 340 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 ZBTB8AQ96BR9 441 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 SH3YL1Q96HL8 342 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-210ENST00000416778 WFIKKN1Q96NZ8 548 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 SORT1Q99523 831 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 OPN3Q9H1Y3 402 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-210ENST00000416778 NOP53Q9NZM5 478 aaKnown RBP16.05■□□□□ 0.16
CPNE1-210ENST00000416778 NDRG3Q9UGV2 375 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 EDARQ9UNE0 448 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 FAF1Q9UNN5 650 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-210ENST00000416778 PLEKHA6Q9Y2H5 1048 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 RAP2CQ9Y3L5 183 aa16.05■□□□□ 0.16
CPNE1-210ENST00000416778 NPIPB9F8W1W9 429 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 EIF1AYO14602 144 aaKnown RBP16.04■□□□□ 0.16
CPNE1-210ENST00000416778 CFLARO15519 480 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 OIP5O43482 229 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 SCN2BO60939 215 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 LINGO3P0C6S8 592 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 MYZAPP0CAP1 466 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 CD8BP10966 210 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 IL11P20809 199 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 DNASE1P24855 282 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 CD79BP40259 229 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 RPL14P50914 215 aaKnown RBP16.04■□□□□ 0.16
CPNE1-210ENST00000416778 ATP12AP54707 1039 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 TP53BP2Q13625 1128 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 SPDYE7PQ495Y7 208 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 CBLN3Q6UW01 205 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 C6orf120Q7Z4R8 191 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 MTERF4Q7Z6M4 381 aaKnown RBP16.04■□□□□ 0.16
CPNE1-210ENST00000416778 OR10D3Q8NH80 312 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 MOAP1Q96BY2 351 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 ZBTB9Q96C00 473 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 CHMP6Q96FZ7 201 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 PPP1R36Q96LQ0 422 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 SDF2Q99470 211 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 PLSCR4Q9NRQ2 329 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 ELOVL5Q9NYP7 299 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 HAO1Q9UJM8 370 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 ICAM5Q9UMF0 924 aa16.04■□□□□ 0.16
CPNE1-210ENST00000416778 A0A0J9YW62 118 aa16.03■□□□□ 0.16
CPNE1-210ENST00000416778 A0A1W2PPR1 153 aa16.03■□□□□ 0.16
CPNE1-210ENST00000416778 CASKO14936 926 aa16.03■□□□□ 0.16
CPNE1-210ENST00000416778 SNUPNO95149 360 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms