RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 ARPC5O15511 151 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 SOCS5O75159 536 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 ENTPD6O75354 484 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 ZNF8P17098 575 aaPredicted RBP7.35□□□□□ -1.23
SIK3-203ENST00000415541 CXCL2P19875 107 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 CNR2P34972 360 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 SLC1A3P43003 542 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 GCGRP47871 477 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 SNTB2Q13425 540 aaKnown RBP7.35□□□□□ -1.23
SIK3-203ENST00000415541 HTR4Q13639 388 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 COL9A2Q14055 689 aaPredicted RBP7.35□□□□□ -1.23
SIK3-203ENST00000415541 TMEM44Q2T9K0 475 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 UAP1L1Q3KQV9 507 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 LRIF1Q5T3J3 769 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 IDNKQ5T6J7 187 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 CRTC1Q6UUV9 634 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 QSOX2Q6ZRP7 698 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 DPPA2Q7Z7J5 298 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 MARCH9Q86YJ5 346 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 MSRB3Q8IXL7 192 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 RNF113BQ8IZP6 322 aaKnown RBP7.35□□□□□ -1.23
SIK3-203ENST00000415541 WFIKKN2Q8TEU8 576 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 TSSK3Q96PN8 268 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 ISYNA1Q9NPH2 558 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 LHX3Q9UBR4 397 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 FBXL21Q9UKT6 434 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 FXYD6-FXYD2A0A087WZ82 144 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 MGAT4DA6NG13 374 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 UBE2CO00762 179 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 MMP2P08253 660 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 PRDX3P30048 256 aaKnown RBP7.35□□□□□ -1.23
SIK3-203ENST00000415541 FGF9P31371 208 aaPredicted RBP7.35□□□□□ -1.23
SIK3-203ENST00000415541 GABRA5P31644 462 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 POU3F4P49335 361 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 NUBP1P53384 320 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 WNT4P56705 351 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 BLOC1S1P78537 153 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 ECH1Q13011 328 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 ALKBH1Q13686 389 aaKnown RBP7.35□□□□□ -1.23
SIK3-203ENST00000415541 RFTN2Q52LD8 501 aaPredicted RBP7.35□□□□□ -1.23
SIK3-203ENST00000415541 LYPD4Q6UWN0 246 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 DCUN1D3Q8IWE4 304 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 CCDC116Q8IYX3 515 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 ADGRG2Q8IZP9 1017 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 TEX26Q8N6G2 289 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 OR52J3Q8NH60 311 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 GOT1L1Q8NHS2 421 aaPredicted RBP7.35□□□□□ -1.23
SIK3-203ENST00000415541 NEIL3Q8TAT5 605 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 ZNF689Q96CS4 500 aaPredicted RBP7.35□□□□□ -1.23
SIK3-203ENST00000415541 OTUB2Q96DC9 234 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 EDEM2Q9BV94 578 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 TSSK6Q9BXA6 273 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 C1QTNF3Q9BXJ4 246 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 FXYD6Q9H0Q3 95 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 ACTL8Q9H568 366 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 GFOD1Q9NXC2 390 aa7.35□□□□□ -1.23
SIK3-203ENST00000415541 TEX10Q9NXF1 929 aaPredicted RBP7.35□□□□□ -1.23
SIK3-203ENST00000415541 TRDV1A0A1B0GX56 115 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 HMSDA8MTL9 139 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 IMPA2O14732 288 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 GPR37O15354 613 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 SC5DO75845 299 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 KAT7O95251 611 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 KLK3P07288 261 aaPredicted RBP7.34□□□□□ -1.23
SIK3-203ENST00000415541 SRPRAP08240 638 aaKnown RBP7.34□□□□□ -1.23
SIK3-203ENST00000415541 SYPP08247 313 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 POU3F2P20265 443 aaPredicted RBP7.34□□□□□ -1.23
SIK3-203ENST00000415541 MAPK3P27361 379 aaPredicted RBP7.34□□□□□ -1.23
SIK3-203ENST00000415541 VIPR1P32241 457 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 CAV3P56539 151 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 SNRPGP62308 76 aaKnown RBP7.34□□□□□ -1.23
SIK3-203ENST00000415541 HMGCS1Q01581 520 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 ACSM2AQ08AH3 577 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 GTF2H2Q13888 395 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 VEZF1Q14119 521 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 SERTAD2Q14140 314 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 KIAA0040Q15053 153 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 ACSM2BQ68CK6 577 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 GTF2H2CQ6P1K8 395 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 RBMS3Q6XE24 437 aaKnown RBP7.34□□□□□ -1.23
SIK3-203ENST00000415541 MBOAT1Q6ZNC8 495 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 LHFPL3Q86UP9 236 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 LDLRAD3Q86YD5 345 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 ZNF561Q8N587 486 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 SPICQ8N5J4 248 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 ZSCAN1Q8NBB4 408 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 GTPBP3Q969Y2 492 aaKnown RBP7.34□□□□□ -1.23
SIK3-203ENST00000415541 TIFAQ96CG3 184 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 DOHHQ9BU89 302 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 CLMPQ9H6B4 373 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 LRTM1Q9HBL6 345 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 M0R129 80 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 CLIC1O00299 241 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 ZNF14P17017 642 aaPredicted RBP7.34□□□□□ -1.23
SIK3-203ENST00000415541 SOAT1P35610 550 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 RAB5CP51148 216 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 IFI44LQ53G44 452 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 FAM78AQ5JUQ0 283 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 SFRP5Q5T4F7 317 aa7.34□□□□□ -1.23
SIK3-203ENST00000415541 FAM111BQ6SJ93 734 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms