RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 IGKV1D-16P01601 117 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 ELK4P28324 431 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 CRISP3P54108 245 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 IFITM3Q01628 133 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 CHRNEQ04844 493 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 CYP27C1Q4G0S4 372 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 DCST2Q5T1A1 773 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 SLC16A12Q6ZSM3 486 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 VTCN1Q7Z7D3 282 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 MFSD4AQ8N468 514 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 MAGEE2Q8TD90 523 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-202ENST00000414700 SEPHS2Q99611 448 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 GPR87Q9BY21 358 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 SEMA4CQ9C0C4 833 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 THSD1Q9NS62 852 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 EXD2Q9NVH0 621 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 PRODH2Q9UF12 536 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 PPIEQ9UNP9 301 aaKnown RBP14.34□□□□□ -0.11
SHMT2-202ENST00000414700 ANGPT4Q9Y264 503 aa14.34□□□□□ -0.11
SHMT2-202ENST00000414700 CNTRLQ7Z7A1 2325 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 CENPVL1A0A0U1RR11 272 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 SYNDIG1LA6NDD5 238 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 KCNK2O95069 426 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 ZNF682O95780 498 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 MT-ND1P03886 318 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 SDHBP21912 280 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 CD82P27701 267 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 RNF4P78317 190 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 SSPNQ14714 243 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 ZNHIT3Q15649 155 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-202ENST00000414700 ARHGAP11BQ3KRB8 267 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 ATAD3BQ5T9A4 648 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 FRRS1Q6ZNA5 592 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 VASH1Q7L8A9 365 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-202ENST00000414700 PIWIL3Q7Z3Z3 882 aaKnown RBP14.33□□□□□ -0.12
SHMT2-202ENST00000414700 TXNDC15Q96J42 360 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 TRNT1Q96Q11 434 aaKnown RBP14.33□□□□□ -0.12
SHMT2-202ENST00000414700 SCNM1Q9BWG6 230 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 FUNDC2Q9BWH2 189 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 WWTR1Q9GZV5 400 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 WARS2Q9UGM6 360 aaKnown RBP14.33□□□□□ -0.12
SHMT2-202ENST00000414700 WASF3Q9UPY6 502 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 MGAQ8IWI9 3026 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 ACACAQ13085 2346 aa14.33□□□□□ -0.12
SHMT2-202ENST00000414700 NPIPA5A0A0B4J1W7 369 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 TRBV11-1A0A0K0K1C0 115 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 C2orf92A0A1B0GVN3 265 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 NPIPA7E9PJI5 369 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 DNAJB5O75953 348 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 CD63P08962 238 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 NPIPA8P0DM63 369 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 POU6F2P78424 691 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-202ENST00000414700 IFITM2Q01629 132 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 CDC20Q12834 499 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 DUSP7Q16829 419 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 BTBD16Q32M84 506 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 CRB2Q5IJ48 1285 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 TYW3Q6IPR3 259 aaKnown RBP14.32□□□□□ -0.12
SHMT2-202ENST00000414700 AKAP14Q86UN6 197 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 VASH2Q86V25 355 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 SPARTQ8N0X7 666 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 PAPD5Q8NDF8 572 aaKnown RBP14.32□□□□□ -0.12
SHMT2-202ENST00000414700 PIK3C3Q8NEB9 887 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 IMMP1LQ96LU5 166 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 COL21A1Q96P44 957 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 BCL7BQ9BQE9 202 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 HOXD1Q9GZZ0 328 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 ZNF700Q9H0M5 742 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 ING2Q9H160 280 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 LIPT1Q9Y234 373 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 TMEM200CA6NKL6 621 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 ZNF354AO60765 605 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-202ENST00000414700 UGT2B11O75310 529 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 AGR2O95994 175 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 LDLRP01130 860 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 PPICP45877 212 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 NR0B1P51843 470 aaKnown RBP14.32□□□□□ -0.12
SHMT2-202ENST00000414700 GABARAPL2P60520 117 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 PRR22Q8IZ63 422 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 CHDHQ8NE62 594 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-202ENST00000414700 OR52E4Q8NGH9 312 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 LILRB4Q8NHJ6 448 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 MUL1Q969V5 352 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 TPD52L3Q96J77 140 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 BTBD2Q9BX70 525 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 ZNF350Q9GZX5 532 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 ZNF160Q9HCG1 818 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 BCL2L10Q9HD36 194 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 KCNE5Q9UJ90 142 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 OR10H1Q9Y4A9 318 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 DSPPQ9NZW4 1301 aa14.32□□□□□ -0.12
SHMT2-202ENST00000414700 MFN2O95140 757 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 LIPCP11150 499 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 LIFP15018 202 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 TNFRSF1BP20333 461 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 CRHBPP24387 322 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 PIGAP37287 484 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 RNF144AP50876 292 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-202ENST00000414700 GPR68Q15743 365 aa14.31□□□□□ -0.12
SHMT2-202ENST00000414700 DESI1Q6ICB0 168 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms