RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 RPS3AP61247 264 aaKnown RBP13.34□□□□□ -0.27
CHD1-202ENST00000414220 GUCY1A3Q02108 690 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 HSPB2Q16082 182 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 KLHL26Q53HC5 615 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 RIPPLY2Q5TAB7 128 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 BLOC1S3Q6QNY0 202 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 DNAJC14Q6Y2X3 702 aaPredicted RBP13.34□□□□□ -0.27
CHD1-202ENST00000414220 ZAR1Q86SH2 424 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 ZNF619Q8N2I2 560 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 TOR1AIP2Q8NFQ8 470 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 RFWD2Q8NHY2 731 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 ZFP90Q8TF47 636 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 RAB8BQ92930 207 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 WDYHV1Q96HA8 205 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 SH3YL1Q96HL8 342 aaPredicted RBP13.34□□□□□ -0.27
CHD1-202ENST00000414220 TRNT1Q96Q11 434 aaKnown RBP13.34□□□□□ -0.27
CHD1-202ENST00000414220 TRIB1Q96RU8 372 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 ZNF350Q9GZX5 532 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 CALHM2Q9HA72 323 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 TPT1P8Q9HAU6 139 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 P2RX2Q9UBL9 471 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 MKLN1Q9UL63 735 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 HRH3Q9Y5N1 445 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 AP4B1Q9Y6B7 739 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 SPENQ96T58 3664 aaKnown RBP13.34□□□□□ -0.27
CHD1-202ENST00000414220 GTF3C1Q12789 2109 aa13.34□□□□□ -0.27
CHD1-202ENST00000414220 EXPH5Q8NEV8 1989 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 A0A096LPI6 279 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 SERINC4A6NH21 518 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 HMGN4O00479 90 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 ANGPT2O15123 496 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 ZNF264O43296 627 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 RNF224P0DH78 156 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 GLI4P10075 376 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 UBL4AP11441 157 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 ZNF17P17021 662 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 GFRA1P56159 465 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 SRYQ05066 204 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 ZNF141Q15928 474 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 PDSS1Q5T2R2 415 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 LRRC74BQ6ZQY2 392 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 EIF3MQ7L2H7 374 aaKnown RBP13.33□□□□□ -0.28
CHD1-202ENST00000414220 TMCO5AQ8N6Q1 288 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 PNPT1Q8TCS8 783 aaKnown RBP13.33□□□□□ -0.28
CHD1-202ENST00000414220 GTF2H4Q92759 462 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 LRRC46Q96FV0 321 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 TMEM120AQ9BXJ8 343 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 RTN4RQ9BZR6 473 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 SERHL2Q9H4I8 314 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 CCDC134Q9H6E4 229 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 MTHFD2LQ9H903 347 aaPredicted RBP13.33□□□□□ -0.28
CHD1-202ENST00000414220 KCNJ16Q9NPI9 418 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.33□□□□□ -0.28
CHD1-202ENST00000414220 FGFR1OP2Q9NVK5 253 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 CORO2BQ9UQ03 480 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 RNF6Q9Y252 685 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 VDAC3Q9Y277 283 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 SLC35A3Q9Y2D2 325 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 NDUFAF1Q9Y375 327 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 HIVEP3Q5T1R4 2406 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 MYO7BQ6PIF6 2116 aa13.33□□□□□ -0.28
CHD1-202ENST00000414220 NPIPA5A0A0B4J1W7 369 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 A0A1W2PP18 115 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 OR2M5A3KFT3 312 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 CD8B2A6NJW9 211 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 EVPLLA8MZ36 301 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 NPIPA7E9PJI5 369 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 H3BML4 177 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 FCMRO60667 390 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 CYP7B1O75881 506 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 NPIPA8P0DM63 369 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 ME2P23368 584 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 HTR1EP28566 365 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 TIMP3P35625 211 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 CRISP3P54108 245 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 DSTNP60981 165 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 EEF1A1P68104 462 aaKnown RBP13.32□□□□□ -0.28
CHD1-202ENST00000414220 FADDQ13158 208 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 CBFBQ13951 182 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 ACSF3Q4G176 576 aaPredicted RBP13.32□□□□□ -0.28
CHD1-202ENST00000414220 PDZK1Q5T2W1 519 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 EEF1A1P5Q5VTE0 462 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 NSUN5P2Q63ZY6 315 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 RTL6Q6ICC9 239 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 TYW3Q6IPR3 259 aaKnown RBP13.32□□□□□ -0.28
CHD1-202ENST00000414220 SLC2A7Q6PXP3 512 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 TSPEARQ8WU66 669 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 TM9SF2Q99805 663 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 SAP130Q9H0E3 1048 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 ARMC7Q9H6L4 198 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 PAQR5Q9NXK6 330 aaPredicted RBP13.32□□□□□ -0.28
CHD1-202ENST00000414220 LEF1Q9UJU2 399 aaPredicted RBP13.32□□□□□ -0.28
CHD1-202ENST00000414220 CARD8Q9Y2G2 431 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 FAM215AQ9Y5M1 114 aa13.32□□□□□ -0.28
CHD1-202ENST00000414220 ZNF407Q9C0G0 2248 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 GJE1A6NN92 205 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 C5orf58C9J3I9 102 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 NPIPB9F8W1W9 429 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 CLIC1O00299 241 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 DVL2O14641 736 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms