RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 MEPCEQ7L2J0 689 aaKnown RBP13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 PRSS45Q7RTY3 260 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 POGLUT1Q8NBL1 392 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 ACOT11Q8WXI4 607 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 C10orf90Q96M02 699 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 INPP5EQ9NRR6 644 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 SPATA6Q9NWH7 488 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 LOC100509620A0A075B734 347 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 NEDD8-MDP1E9PL57 170 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 RFXAPO00287 272 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 HIST1H2ABP04908 130 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 HTR1FP30939 366 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 WNT3P56703 355 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 TCTN3Q6NUS6 607 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 Q6ZVU0 165 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 KCTD9Q7L273 389 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 HIST3H2AQ7L7L0 130 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 ZER1Q7Z7L7 766 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 COX18Q8N8Q8 333 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 LGALS14Q8TCE9 139 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 CASTOR1Q8WTX7 329 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 HIST1H2ACQ93077 130 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 CPNE2Q96FN4 548 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 SLC41A3Q96GZ6 507 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 KXD1Q9BQD3 176 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 PRMT8Q9NR22 394 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 POT1Q9NUX5 634 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 LHX3Q9UBR4 397 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 SLC6A14Q9UN76 642 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 NPFFR2Q9Y5X5 522 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 PFN3P60673 137 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 PUM1Q14671 1186 aaKnown RBP eCLIP13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 AVPI1Q5T686 147 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 TSSK4Q6SA08 328 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 PGAP1Q75T13 922 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 LIMS2Q7Z4I7 341 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 MOAP1Q96BY2 351 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 A4GALTQ9NPC4 353 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 PLAGL1Q9UM63 463 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 HEPACAM2A8MVW5 462 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 SLC6A11P48066 632 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 TCTEX1D2Q8WW35 142 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF768Q9H5H4 540 aaKnown RBP13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 SLC6A20Q9NP91 592 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 GKN3PP0CG01 181 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF8P17098 575 aaPredicted RBP13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 DLSTP36957 453 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 TMEM201Q5SNT2 666 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 HENMT1Q5T8I9 393 aaKnown RBP13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 LIPIQ6XZB0 460 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 SYNPRQ8TBG9 265 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 SLC22A8Q8TCC7 542 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 SOCS4Q8WXH5 440 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 S100PBPQ96BU1 408 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF514Q96K75 400 aaPredicted RBP13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF350Q9GZX5 532 aa13.04□□□□□ -0.32
CLTCL1-201ENST00000412649 A0A0D9SG52 128 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 KDM4FA0A1W2PPD8 638 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 NFKBIEO00221 500 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF593O00488 134 aaPredicted RBP13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 SOCS6O14544 535 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 PCDH8O95206 1070 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 UGT2B7P16662 529 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 SLC6A12P48065 614 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 ST3GAL2Q16842 350 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF385BQ569K4 471 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 KIAA1324Q6UXG2 1013 aaKnown RBP13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 OR11H7Q8NGC8 314 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 OR1J4Q8NGS1 313 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 OR2T4Q8NH00 348 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 SMPDL3BQ92485 455 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 NKD1Q969G9 470 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 SYNPO2LQ9H987 977 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 SLC25A19Q9HC21 320 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 ADAP2Q9NPF8 381 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 PDE4DIPQ5VU43 2346 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 A0A1B0GVT2 93 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 AIPO00170 330 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 ATP1B1P05026 303 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 FOSL1P15407 271 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 CXCL3P19876 107 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 CR2P20023 1033 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 PSMA3P25788 255 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 HMGA2P52926 109 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 GPR85P60893 370 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 KHDRBS2Q5VWX1 349 aaKnown RBP13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 CYB561A3Q8NBI2 242 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 CXorf40AQ8TE69 158 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 NEURL3Q96EH8 262 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 PDXPQ96GD0 296 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 ADAD1Q96M93 576 aaKnown RBP13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 DPH1Q9BZG8 443 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 QRSL1Q9H0R6 528 aaKnown RBP13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 SLC25A18Q9H1K4 315 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 FLVCR2Q9UPI3 526 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF840PA6NDX5 716 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 SMAD6O43541 496 aaKnown RBP13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 STATHP02808 62 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 CD34P28906 385 aa13.03□□□□□ -0.32
CLTCL1-201ENST00000412649 TAS2R38P59533 333 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms