RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 ZNF117Q03924 483 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 CHRNEQ04844 493 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 KLF10Q13118 480 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 GANABQ14697 944 aaKnown RBP11.94□□□□□ -0.5
HDAC8-210ENST00000412342 TOMM20Q15388 145 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 GPR68Q15743 365 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 PDZK1Q5T2W1 519 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 ATAD3BQ5T9A4 648 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 CBLN3Q6UW01 205 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 C3P1Q6ZMU1 363 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 MTERF4Q7Z6M4 381 aaKnown RBP11.94□□□□□ -0.5
HDAC8-210ENST00000412342 MISPQ8IVT2 679 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 ZNF619Q8N2I2 560 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 OR5M9Q8NGP3 310 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 PHF10Q8WUB8 498 aaKnown RBP11.94□□□□□ -0.5
HDAC8-210ENST00000412342 OIT3Q8WWZ8 545 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 ZG16BQ96DA0 208 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 TRNT1Q96Q11 434 aaKnown RBP11.94□□□□□ -0.5
HDAC8-210ENST00000412342 VKORC1Q9BQB6 163 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 TP63Q9H3D4 680 aaPredicted RBP11.94□□□□□ -0.5
HDAC8-210ENST00000412342 TAS2R10Q9NYW0 307 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 LEF1Q9UJU2 399 aaPredicted RBP11.94□□□□□ -0.5
HDAC8-210ENST00000412342 ICAM5Q9UMF0 924 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 LIPT1Q9Y234 373 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 NDUFAF1Q9Y375 327 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 WDR45Q9Y484 360 aa11.94□□□□□ -0.5
HDAC8-210ENST00000412342 SPTAN1Q13813 2472 aaKnown RBP11.93□□□□□ -0.5
HDAC8-210ENST00000412342 C15orf38-AP3S2A0A0A6YYH1 394 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 SERINC4A6NH21 518 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 ZG16O60844 167 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 BCAS1O75363 584 aaPredicted RBP11.93□□□□□ -0.5
HDAC8-210ENST00000412342 ACTL6AO96019 429 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 SNRPB2P08579 225 aaKnown RBP11.93□□□□□ -0.5
HDAC8-210ENST00000412342 NUDT7P0C024 238 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 TFPTP0C1Z6 253 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 RPS4Y1P22090 263 aaKnown RBP11.93□□□□□ -0.5
HDAC8-210ENST00000412342 MSX1P28360 303 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 ADH7P40394 386 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 ANXA11P50995 505 aaKnown RBP11.93□□□□□ -0.5
HDAC8-210ENST00000412342 CASP6P55212 293 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 DSTNP60981 165 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 FADDQ13158 208 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 FGFBP1Q14512 234 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 RGNQ15493 299 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 ZNF630Q2M218 657 aaPredicted RBP11.93□□□□□ -0.5
HDAC8-210ENST00000412342 NDUFAF6Q330K2 333 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 ARSKQ6UWY0 536 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 LRRC74BQ6ZQY2 392 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 IFNEQ86WN2 208 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 ZNF527Q8NB42 609 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 FAM71CQ8NEG0 241 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 OR14L1PQ8NHC6 308 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 ZNF524Q96C55 264 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 WDYHV1Q96HA8 205 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 PSMG3-AS1Q96PY0 264 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 NPAS1Q99742 590 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 CPPED1Q9BRF8 314 aaPredicted RBP11.93□□□□□ -0.5
HDAC8-210ENST00000412342 QRSL1Q9H0R6 528 aaKnown RBP11.93□□□□□ -0.5
HDAC8-210ENST00000412342 EXO5Q9H790 373 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 PTGES2Q9H7Z7 377 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 HHATLQ9HCP6 504 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 DKKL1Q9UK85 242 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 ACAD8Q9UKU7 415 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 L3MBTL1Q9Y468 752 aa11.93□□□□□ -0.5
HDAC8-210ENST00000412342 COL12A1Q99715 3063 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 PCNX1Q96RV3 2341 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 C7orf72A4D263 438 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 KDM4EB2RXH2 506 aaPredicted RBP11.92□□□□□ -0.5
HDAC8-210ENST00000412342 ANGPT2O15123 496 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 DNAJA2O60884 412 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 WDR1O75083 606 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 HPGDP15428 266 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 HK1P19367 917 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 CHMP24386 653 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 PSMA4P25789 261 aaKnown RBP11.92□□□□□ -0.5
HDAC8-210ENST00000412342 ACVR2AP27037 513 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 ADSLP30566 484 aaPredicted RBP11.92□□□□□ -0.5
HDAC8-210ENST00000412342 CRATP43155 626 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 LHX2P50458 406 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 CLDN18P56856 261 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 SKP2Q13309 424 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 GLYR1Q49A26 553 aaPredicted RBP11.92□□□□□ -0.5
HDAC8-210ENST00000412342 GPAT3Q53EU6 434 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 RUNDC3AQ59EK9 446 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 WLSQ5T9L3 541 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 SPATA21Q7Z572 469 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 DHDDSQ86SQ9 333 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 ULK2Q8IYT8 1036 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 B4GALNT2Q8NHY0 566 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 PHOSPHO1Q8TCT1 267 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 SLC38A5Q8WUX1 472 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 ITLN2Q8WWU7 325 aaPredicted RBP11.92□□□□□ -0.5
HDAC8-210ENST00000412342 ABTB1Q969K4 478 aaPredicted RBP11.92□□□□□ -0.5
HDAC8-210ENST00000412342 SH3YL1Q96HL8 342 aaPredicted RBP11.92□□□□□ -0.5
HDAC8-210ENST00000412342 SFXN2Q96NB2 322 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 MRGBPQ9NV56 204 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 MED17Q9NVC6 651 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 P2RX2Q9UBL9 471 aa11.92□□□□□ -0.5
HDAC8-210ENST00000412342 SUCOQ9UBS9 1254 aaKnown RBP11.92□□□□□ -0.5
HDAC8-210ENST00000412342 CARD8Q9Y2G2 431 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms