RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 HTATSF1O43719 755 aaKnown RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 SPINK4O60575 86 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 CYTIPO60759 359 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 STK10O94804 968 aaKnown RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 IGF2P01344 180 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 CSF2P04141 144 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 KRT18P05783 430 aaKnown RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 CD7P09564 240 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 TLX1NBP0CAT3 122 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 PGA4P0DJD7 388 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 PGA3P0DJD8 388 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 PGA5P0DJD9 388 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 C1GALT1C1LP0DN25 315 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 CKMT1AP12532 417 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 PVRP15151 417 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 IVDP26440 423 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 PKLRP30613 574 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 STX2P32856 288 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 SPRP35270 261 aaPredicted RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 RFC3P40938 356 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 OPRK1P41145 380 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 AQP5P55064 265 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 FOXA1P55317 472 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 MAZP56270 477 aaKnown RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 CLDN2P57739 230 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 TIRAPP58753 221 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 ROMO1P60602 79 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 SYCNQ0VAF6 134 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 CCNIQ14094 377 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 GALNT3Q14435 633 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 MAD2L1BPQ15013 274 aaPredicted RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZNF699Q32M78 642 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 SP6Q3SY56 376 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 MAP9Q49MG5 647 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 Q5VV11 94 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR4C11Q6IEV9 310 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 KLHL10Q6JEL2 608 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 ACAD10Q6JQN1 1059 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 TTI2Q6NXR4 508 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 GADL1Q6ZQY3 521 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 FAM231DQ6ZW35 169 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 TXNDC2Q86VQ3 553 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 SERPINA9Q86WD7 417 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 LHFPL1Q86WI0 220 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 MFN1Q8IWA4 741 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZNF444Q8N0Y2 327 aaPredicted RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 WDTC1Q8N5D0 677 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 GATD1Q8NB37 220 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR10AD1Q8NGE0 317 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 TCP10LQ8TDR4 215 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 TBCKQ8TEA7 893 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 TGFBRAP1Q8WUH2 860 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 DNAJA4Q8WW22 397 aaPredicted RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 RASSF5Q8WWW0 418 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 UBE2E3Q969T4 207 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 TMEM18Q96B42 140 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 HAVCR1Q96D42 359 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC47A1Q96FL8 570 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 UBE2E2Q96LR5 201 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 IP6K3Q96PC2 410 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 SPACA5Q96QH8 159 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR2V2Q96R30 315 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 ERGIC2Q96RQ1 377 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 GPR21Q99679 349 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 CNFNQ9BYD5 112 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 POTEKPQ9BYX7 375 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 STRADBQ9C0K7 418 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 EIF5A2Q9GZV4 153 aaKnown RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 TMX1Q9H3N1 280 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 CDC42EP4Q9H3Q1 356 aaKnown RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 PTGES2Q9H7Z7 377 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 MOB1AQ9H8S9 216 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 MTHFD2LQ9H903 347 aaPredicted RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 TP53AIP1Q9HCN2 124 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 DMAP1Q9NPF5 467 aaPredicted RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 SMYD2Q9NRG4 433 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 MAN2C1Q9NTJ4 1040 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 LMBRD1Q9NUN5 540 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 VTI1BQ9UEU0 232 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 PRO0255Q9UI72 69 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 KIAA1257Q9ULG3 409 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 PNMA8BQ9ULN7 279 aaPredicted RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 EXOC7Q9UPT5 735 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC27A6Q9Y2P4 619 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 SPIN1Q9Y657 262 aaPredicted RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 CDK13Q14004 1512 aaKnown RBP-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 NRCAMQ92823 1304 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 NUP98P52948 1817 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 PCNTO95613 3336 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 HEATR5AQ86XA9 2040 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 IGHV3-15A0A0B4J1V0 119 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 TMEM223A0PJW6 202 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 ANKRD61A6NGH8 418 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 C17orf98A8MV24 154 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 BTNL10A8MVZ5 291 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 TMEM233B4DJY2 109 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 STX16-NPEPL1H3BU86 382 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 DNM1LO00429 736 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 HSPB6O14558 160 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 ATP6V0E1O15342 81 aa-1.99□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms