RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 FLYWCH1Q4VC44 716 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 YOD1Q5VVQ6 348 aaPredicted RBP12.59□□□□□ -0.39
LIMS1-205ENST00000410093 OLIG3Q7RTU3 272 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 ZNF440Q8IYI8 595 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 POGLUT1Q8NBL1 392 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 ANKK1Q8NFD2 765 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 OR52R1Q8NGF1 315 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 OR52L1Q8NGH7 329 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 FAM46AQ96IP4 442 aaKnown RBP12.59□□□□□ -0.39
LIMS1-205ENST00000410093 COX4I2Q96KJ9 171 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 LRFN5Q96NI6 719 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 GPA33Q99795 319 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 COQ7Q99807 217 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 HOXD1Q9GZZ0 328 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 ERVMER34-1Q9H9K5 563 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 FOLH1BQ9HBA9 442 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 Q9N2J8 555 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 SLC7A7Q9UM01 511 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 MMACHCQ9Y4U1 282 aa12.59□□□□□ -0.39
LIMS1-205ENST00000410093 ISPDA4D126 451 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 ANKRD33BA6NCL7 494 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 UNC119BA6NIH7 251 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 METTL15A6NJ78 407 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 ARHGAP33O14559 1287 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 SURF4O15260 269 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 FOXS1O43638 330 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 CHP2O43745 196 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 DYRK3O43781 588 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 IGFBP1P08833 259 aaPredicted RBP12.58□□□□□ -0.4
LIMS1-205ENST00000410093 MSL3P1P0C860 447 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 TDGF1P13385 188 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 BMP7P18075 431 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 S1PR1P21453 382 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 LCN1P31025 176 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 GPR3P46089 330 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 GABRA4P48169 554 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 PPP5CP53041 499 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 PPP1CAP62136 330 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 LSM3P62310 102 aaKnown RBP12.58□□□□□ -0.4
LIMS1-205ENST00000410093 ID2Q02363 134 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 RPL6Q02878 288 aaKnown RBP12.58□□□□□ -0.4
LIMS1-205ENST00000410093 FOXD4Q12950 439 aaPredicted RBP12.58□□□□□ -0.4
LIMS1-205ENST00000410093 TSTQ16762 297 aaKnown RBP12.58□□□□□ -0.4
LIMS1-205ENST00000410093 PGGHGQ32M88 737 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 WDR45BQ5MNZ6 344 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 NXNL2Q5VZ03 156 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 WDR5BQ86VZ2 330 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 ATCAYQ86WG3 371 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 KMT5CQ86Y97 462 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 NKAIN4Q8IVV8 208 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 NRMQ8IXM6 262 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 LSMEM1Q8N8F7 131 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 PSD4Q8NDX1 1056 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 OR52I1Q8NGK6 324 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 TMEM239Q8WW34 195 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 RLN3Q8WXF3 142 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 DNASE2BQ8WZ79 361 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 OPALINQ96PE5 141 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 OR1F2PQ96R84 312 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 MAP3K3Q99759 626 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 ALOXE3Q9BYJ1 711 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 TPSD1Q9BZJ3 242 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 OCEL1Q9H607 264 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 FAIMQ9NVQ4 179 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 NDUFB11Q9NX14 153 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 ETAA1Q9NY74 926 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 H2AFY2Q9P0M6 372 aaPredicted RBP12.58□□□□□ -0.4
LIMS1-205ENST00000410093 CRNNQ9UBG3 495 aaPredicted RBP12.58□□□□□ -0.4
LIMS1-205ENST00000410093 KLHL3Q9UH77 587 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 SLC6A14Q9UN76 642 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 STUB1Q9UNE7 303 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 MED31Q9Y3C7 131 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 THADAQ6YHU6 1953 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 RIF1Q5UIP0 2472 aaKnown RBP12.58□□□□□ -0.4
LIMS1-205ENST00000410093 FAM186AA6NE01 2351 aa12.58□□□□□ -0.4
LIMS1-205ENST00000410093 A0A075B6Q4 140 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 A0A0A6YYC8 382 aaPredicted RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 CCDC163A0A0D9SF12 145 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 RHPN2P1A8MT19 583 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 I3L1I5 382 aaPredicted RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 M0R129 80 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 FRS3O43559 492 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 HRO43593 1189 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 PFDN1O60925 122 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 CSO75390 466 aaKnown RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 SULT1C4O75897 302 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 CT62P0C5K7 136 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 GAAP10253 952 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 CPEP16870 476 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 EMDP50402 254 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 MLLT10P55197 1068 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 WNT4P56705 351 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 SNRPNP63162 240 aaKnown RBP12.57□□□□□ -0.4
LIMS1-205ENST00000410093 GPLD1P80108 840 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 BNC1Q01954 994 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 ACSM1Q08AH1 577 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 FUT7Q11130 342 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 DSG2Q14126 1118 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 LPAL2Q16609 132 aa12.57□□□□□ -0.4
LIMS1-205ENST00000410093 AMZ1Q400G9 498 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms