RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 COX20Q5RI15 118 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 RAET1LQ5VY80 246 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ENPP6Q6UWR7 440 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 MTERF4Q7Z6M4 381 aaKnown RBP28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 PHOSPHO1Q8TCT1 267 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 RND1Q92730 232 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ROPN1LQ96C74 230 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 SDCCAG3Q96C92 435 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 SPDL1Q96EA4 605 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 SH3YL1Q96HL8 342 aaPredicted RBP28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 TMEM45AQ9NWC5 275 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 MKLN1Q9UL63 735 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 MED12LQ86YW9 2145 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 PRAMEF27A3QJZ7 478 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 KRT75O95678 551 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 NCF2P19878 526 aaPredicted RBP28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 CAPN3P20807 821 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 MSX1P28360 303 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 LHX2P50458 406 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 TXNL4AP83876 142 aaKnown RBP28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ART3Q13508 389 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 AGKQ53H12 422 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 HIST2H2BCQ6DN03 193 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 CGB2Q6NT52 195 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ARSKQ6UWY0 536 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 INTS1Q8N201 2190 aaKnown RBP28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ZNF614Q8N883 585 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 TMEM120AQ9BXJ8 343 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 PAIP1Q9H074 479 aaKnown RBP28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 SLC52A3Q9NQ40 469 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 KCNE5Q9UJ90 142 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 TRIM33Q9UPN9 1127 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 DTNAQ9Y4J8 743 aa28.22■■■□□ 2.11
TRAF3IP1-203ENST00000409739 HCFC1P51610 2035 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 CENPVL1A0A0U1RR11 272 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 KDM4EB2RXH2 506 aaPredicted RBP28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 KIAA0513O60268 411 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 TNFRSF21O75509 655 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 GUSBP08236 651 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 VIMP08670 466 aaKnown RBP28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 TROVE2P10155 538 aaKnown RBP eCLIP28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 CPN1P15169 458 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 CD1EP15812 388 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 STARP49675 285 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ANXA11P50995 505 aaKnown RBP28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 MVDP53602 400 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ZNF117Q03924 483 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ZNF630Q2M218 657 aaPredicted RBP28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 PDZK1Q5T2W1 519 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 TYW3Q6IPR3 259 aaKnown RBP28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 AURKBQ96GD4 344 aaPredicted RBP28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 KLHDC3Q9BQ90 382 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 TPT1P8Q9HAU6 139 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 POLE3Q9NRF9 147 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 COQ3Q9NZJ6 369 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 WDR45Q9Y484 360 aa28.21■■■□□ 2.11
TRAF3IP1-203ENST00000409739 OIP5O43482 229 aa28.2■■■□□ 2.1
TRAF3IP1-203ENST00000409739 HCRTR2O43614 444 aa28.2■■■□□ 2.1
TRAF3IP1-203ENST00000409739 HOXB9P17482 250 aaPredicted RBP28.2■■■□□ 2.1
TRAF3IP1-203ENST00000409739 MDH1P40925 334 aaKnown RBP28.2■■■□□ 2.1
TRAF3IP1-203ENST00000409739 ZNF141Q15928 474 aa28.2■■■□□ 2.1
TRAF3IP1-203ENST00000409739 FRRS1Q6ZNA5 592 aa28.2■■■□□ 2.1
TRAF3IP1-203ENST00000409739 OR5M1Q8NGP8 315 aa28.2■■■□□ 2.1
TRAF3IP1-203ENST00000409739 B4GALNT2Q8NHY0 566 aa28.2■■■□□ 2.1
TRAF3IP1-203ENST00000409739 RNF6Q9Y252 685 aa28.2■■■□□ 2.1
TRAF3IP1-203ENST00000409739 VDAC3Q9Y277 283 aa28.2■■■□□ 2.1
TRAF3IP1-203ENST00000409739 OR2M5A3KFT3 312 aa28.19■■■□□ 2.1
TRAF3IP1-203ENST00000409739 H3BNH8 94 aa28.19■■■□□ 2.1
TRAF3IP1-203ENST00000409739 UGT2B17O75795 530 aa28.19■■■□□ 2.1
TRAF3IP1-203ENST00000409739 ZNF708P17019 499 aa28.19■■■□□ 2.1
TRAF3IP1-203ENST00000409739 CLDN18P56856 261 aa28.19■■■□□ 2.1
TRAF3IP1-203ENST00000409739 TMEM44Q2T9K0 475 aa28.19■■■□□ 2.1
TRAF3IP1-203ENST00000409739 GLYR1Q49A26 553 aaPredicted RBP28.19■■■□□ 2.1
TRAF3IP1-203ENST00000409739 GPAT3Q53EU6 434 aa28.19■■■□□ 2.1
TRAF3IP1-203ENST00000409739 SEM1Q6ZVN7 128 aa28.19■■■□□ 2.1
TRAF3IP1-203ENST00000409739 SAP130Q9H0E3 1048 aa28.19■■■□□ 2.1
TRAF3IP1-203ENST00000409739 RABEP2Q9H5N1 569 aa28.19■■■□□ 2.1
TRAF3IP1-203ENST00000409739 PCDHB14Q9Y5E9 798 aa28.19■■■□□ 2.1
TRAF3IP1-203ENST00000409739 KLF2Q9Y5W3 355 aaPredicted RBP28.19■■■□□ 2.1
TRAF3IP1-203ENST00000409739 A0A096LPI6 279 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 SHISA8B8ZZ34 492 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 H0Y3Z8 333 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 H6PDO95479 791 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 CLDN14O95500 239 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 EPPINO95925 133 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 COL8A1P27658 744 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 ADH7P40394 386 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 MAGEA8P43361 318 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 HPCAP84074 193 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 SRYQ05066 204 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 SYPL1Q16563 259 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 NDUFAF6Q330K2 333 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 AP1ARQ63HQ0 302 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 CBLN3Q6UW01 205 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 CCDC71Q8IV32 467 aaPredicted RBP28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 ZNF619Q8N2I2 560 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 ANKFN1Q8N957 763 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 PIGQQ9BRB3 760 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 MED17Q9NVC6 651 aa28.18■■■□□ 2.1
TRAF3IP1-203ENST00000409739 LIPT1Q9Y234 373 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms