RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 NPIPA3F8WFD2 350 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 DLL1O00548 723 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 YKT6O15498 198 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 RFPL3O75679 317 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 ZNF24P17028 368 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 RAE1P78406 368 aaKnown RBP10.58□□□□□ -0.72
SNX13-202ENST00000409604 NPRL3Q12980 569 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 KIAA0040Q15053 153 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 GLYR1Q49A26 553 aaPredicted RBP10.58□□□□□ -0.72
SNX13-202ENST00000409604 DESI1Q6ICB0 168 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 NAXDQ8IW45 347 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 SLC30A8Q8IWU4 369 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 SGTBQ96EQ0 304 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 LCORQ96JN0 433 aaPredicted RBP10.58□□□□□ -0.72
SNX13-202ENST00000409604 C1QTNF3Q9BXJ4 246 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 ZNF71Q9NQZ8 489 aaPredicted RBP10.58□□□□□ -0.72
SNX13-202ENST00000409604 BATF3Q9NR55 127 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 WBP11Q9Y2W2 641 aaKnown RBP10.58□□□□□ -0.72
SNX13-202ENST00000409604 TRAPPC13A5PLN9 417 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 UTS2O95399 124 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 IGFBP1P08833 259 aaPredicted RBP10.58□□□□□ -0.72
SNX13-202ENST00000409604 ARAFP10398 606 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 ZNF3P17036 446 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 PCGF2P35227 344 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 GDI2P50395 445 aaKnown RBP10.58□□□□□ -0.72
SNX13-202ENST00000409604 TLE3Q04726 772 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 CRTC2Q53ET0 693 aaPredicted RBP10.58□□□□□ -0.72
SNX13-202ENST00000409604 SLC27A4Q6P1M0 643 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 MYCBPQ99417 103 aaPredicted RBP10.58□□□□□ -0.72
SNX13-202ENST00000409604 BTBD2Q9BX70 525 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 PITHD1Q9GZP4 211 aaPredicted RBP10.58□□□□□ -0.72
SNX13-202ENST00000409604 CXorf21Q9HAI6 301 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 ATP13A2Q9NQ11 1180 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 SATB2Q9UPW6 733 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 FARSAQ9Y285 508 aaKnown RBP10.58□□□□□ -0.72
SNX13-202ENST00000409604 MAN2B2Q9Y2E5 1009 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 MYO7BQ6PIF6 2116 aa10.58□□□□□ -0.72
SNX13-202ENST00000409604 CIB4A0PJX0 185 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 LILRA5A6NI73 299 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 PLATP00750 562 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 TACR3P29371 465 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 HOXC12P31275 282 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 RPL5P46777 297 aaKnown RBP10.57□□□□□ -0.72
SNX13-202ENST00000409604 EEF1A1P68104 462 aaKnown RBP10.57□□□□□ -0.72
SNX13-202ENST00000409604 DMPKQ09013 629 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 OR1Q1Q15612 314 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 STK11Q15831 433 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 BICRALQ6AI39 1079 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 ZNF544Q6NX49 715 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 HACD2Q6Y1H2 254 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 FGD2Q7Z6J4 655 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 KIAA1958Q8N8K9 716 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 PPP1R14AQ96A00 147 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 ZMYND19Q96E35 227 aaPredicted RBP10.57□□□□□ -0.72
SNX13-202ENST00000409604 TM9SF2Q99805 663 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 VN1R1Q9GZP7 353 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 HDHD2Q9H0R4 259 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 MED20Q9H944 212 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 AKIRIN1Q9H9L7 192 aaPredicted RBP10.57□□□□□ -0.72
SNX13-202ENST00000409604 ADAM29Q9UKF5 820 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 IER3IP1Q9Y5U9 82 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 SULT2B1O00204 365 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 FMO6PO60774 539 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 SOX6P35712 828 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 E2F1Q01094 437 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 B3GNTL1Q67FW5 361 aaPredicted RBP10.57□□□□□ -0.72
SNX13-202ENST00000409604 KLHL24Q6TFL4 600 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 TMPRSS7Q7RTY8 843 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 IZUMO1Q8IYV9 350 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 OR13C2Q8NGS9 318 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 OR11A1Q9GZK7 315 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 DEFB127Q9H1M4 99 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 GNG8Q9UK08 70 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 ZNF443Q9Y2A4 671 aaPredicted RBP10.57□□□□□ -0.72
SNX13-202ENST00000409604 IGKV1-8A0A0C4DH67 115 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 HMGN4O00479 90 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 TPD52L2O43399 206 aaKnown RBP10.57□□□□□ -0.72
SNX13-202ENST00000409604 CT62P0C5K7 136 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 HSD17B7P56937 341 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 TRA2BP62995 288 aaKnown RBP10.57□□□□□ -0.72
SNX13-202ENST00000409604 COQ5Q5HYK3 327 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 STPG1Q5TH74 334 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 SLC6A19Q695T7 634 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 ZNF676Q8N7Q3 588 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 TMEM52Q8NDY8 209 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 TMEM239Q8WW34 195 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 ASB12Q8WXK4 309 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 RXFP3Q9NSD7 469 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 GPR83Q9NYM4 423 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 CCDC88CQ9P219 2028 aa10.57□□□□□ -0.72
SNX13-202ENST00000409604 TFECO14948 347 aaPredicted RBP10.56□□□□□ -0.72
SNX13-202ENST00000409604 TBX1O43435 398 aa10.56□□□□□ -0.72
SNX13-202ENST00000409604 NADKO95544 446 aaPredicted RBP10.56□□□□□ -0.72
SNX13-202ENST00000409604 GSTM2P28161 218 aa10.56□□□□□ -0.72
SNX13-202ENST00000409604 NR1H2P55055 460 aa10.56□□□□□ -0.72
SNX13-202ENST00000409604 OR12D2P58182 307 aa10.56□□□□□ -0.72
SNX13-202ENST00000409604 ST3GAL4Q11206 333 aa10.56□□□□□ -0.72
SNX13-202ENST00000409604 ATP1A4Q13733 1029 aa10.56□□□□□ -0.72
SNX13-202ENST00000409604 GARNL3Q5VVW2 1013 aa10.56□□□□□ -0.72
SNX13-202ENST00000409604 LRFN4Q6PJG9 635 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms