RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 OLIG3Q7RTU3 272 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 DHFR2Q86XF0 187 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 CMIPQ8IY22 773 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 CISD2Q8N5K1 135 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 ZNF614Q8N883 585 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 OR52E4Q8NGH9 312 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 OR52P1PQ8NH57 321 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 WDR60Q8WVS4 1066 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 SNRNP40Q96DI7 357 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 NSMCE2Q96MF7 247 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 TRIM15Q9C019 465 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.13■□□□□ 0.013e-7■■■■■ 27.3
TSPAN4-208ENST00000409531 PCDHAC1Q9H158 963 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 SH2D2AQ9NP31 389 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 SACM1LQ9NTJ5 587 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 ADPRHL2Q9NX46 363 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 KLRF1Q9NZS2 232 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 SLC7A8Q9UHI5 535 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 RPS6KA6Q9UK32 745 aa15.13■□□□□ 0.01
TSPAN4-208ENST00000409531 NPIPA5A0A0B4J1W7 369 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 TRAV17A0A0B4J275 112 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 ANKRD33BA6NCL7 494 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 PRAMEF25A6NGN4 478 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 ALG1L2C9J202 215 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 NPIPA7E9PJI5 369 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 FADS1O60427 444 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 SLC25A12O75746 678 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 PABPC4LP0CB38 370 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 NPIPA8P0DM63 369 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 NID1P14543 1247 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 CD46P15529 392 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 NCK1P16333 377 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 KCNC4Q03721 635 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 KLHL26Q53HC5 615 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 EIPR1Q53HC9 387 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 ZNF311Q5JNZ3 666 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 PDZK1Q5T2W1 519 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 SLC30A6Q6NXT4 461 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 MISPQ8IVT2 679 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 EID3Q8N140 333 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 POGLUT1Q8NBL1 392 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 PSD4Q8NDX1 1056 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 RNF138Q8WVD3 245 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 LZICQ8WZA0 190 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 LRGUKQ96M69 825 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 C5orf34Q96MH7 638 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 NODALQ96S42 347 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 OSBPL11Q9BXB4 747 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 QRSL1Q9H0R6 528 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 SDHAF3Q9NRP4 125 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 SLC35A3Q9Y2D2 325 aa15.12■□□□□ 0.01
TSPAN4-208ENST00000409531 PRRC2CQ9Y520 2896 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 HECTD1Q9ULT8 2610 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 NDUFB5O43674 189 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 GCM2O75603 506 aaPredicted RBP15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 NEURL1O76050 574 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 MFN2O95140 757 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 F10P00742 488 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 CCL3P10147 92 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 PRKAR1BP31321 381 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 ADH7P40394 386 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 CASP3P42574 277 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 ST13P50502 369 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 KCNJ2P63252 427 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 KCNJ10P78508 379 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 FLOT2Q14254 428 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 RNF220Q5VTB9 566 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 DESI1Q6ICB0 168 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 LCN8Q6JVE9 175 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 RPUSD3Q6P087 351 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 EIF3MQ7L2H7 374 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 MDGA2Q7Z553 956 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 ATCAYQ86WG3 371 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 TMEM178AQ8NBL3 297 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 MDS2Q8NDY4 140 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 GRHL3Q8TE85 626 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 ZG16BQ96DA0 208 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 SIGLEC12Q96PQ1 595 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 PINK1Q9BXM7 581 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 EVA1AQ9H8M9 152 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 FLRT3Q9NZU0 649 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 KCNE5Q9UJ90 142 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 SLC13A4Q9UKG4 626 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 CNOT11Q9UKZ1 510 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 BAG5Q9UL15 447 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 SAMD4AQ9UPU9 718 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 POMPQ9Y244 141 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 ZNF443Q9Y2A4 671 aaPredicted RBP15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 KLF13Q9Y2Y9 288 aaPredicted RBP15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 PCDHGB6Q9Y5F9 930 aa15.11■□□□□ 0.01
TSPAN4-208ENST00000409531 SERINC4A6NH21 518 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 ACOT8O14734 319 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 SNX4O95219 450 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 ANGPTL1O95841 491 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 SERPINA1P01009 418 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 NQO1P15559 274 aaKnown RBP15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 MS4A2Q01362 244 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 C17orf67Q0P5P2 114 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 FGFBP1Q14512 234 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms