RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 OR10A4Q9H209 315 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 SMOC1Q9H4F8 434 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 KAT8Q9H7Z6 458 aaKnown RBP4.7□□□□□ -1.66
SCN3A-203ENST00000409101 COMMD3Q9UBI1 195 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 POM121BA6NF01 834 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 K7ESM1 405 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 CASC3O15234 703 aaKnown RBP4.7□□□□□ -1.66
SCN3A-203ENST00000409101 GPR39O43194 453 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 ZNF264O43296 627 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 SCGNO76038 276 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 ATG12O94817 140 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 FUT4P22083 530 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 CD40LGP29965 261 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 BCL6P41182 706 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 SH3BP2P78314 561 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 GALNT1Q10472 559 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-203ENST00000409101 DNASE1L3Q13609 305 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 SLC10A1Q14973 349 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 METRNLQ641Q3 311 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 C5orf46Q6UWT4 87 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 SLC35F2Q8IXU6 374 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 OR5D16Q8NGK9 328 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 CPT1CQ8TCG5 803 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 DUSP19Q8WTR2 217 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 TCEAL3Q969E4 200 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 LRRC61Q9BV99 259 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 PAK1IP1Q9NWT1 392 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-203ENST00000409101 MKS1Q9NXB0 559 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 CDH10Q9Y6N8 788 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 hCG_1809904A0A1W2PP81 198 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 A0A1W2PPE2 198 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 A0A1W2PR64 198 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 A0A1W2PRV1 198 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 LRRC30A6NM36 301 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 M0R129 80 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 EIF1BO60739 113 aaKnown RBP4.7□□□□□ -1.66
SCN3A-203ENST00000409101 HTR3BO95264 441 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 ZDHHC11BP0C7U3 371 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 SLC35E2P0CK97 266 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 TMEM225BP0DP42 221 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 ANXA3P12429 323 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 HTR6P50406 440 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 RPS23P62266 143 aaKnown RBP4.7□□□□□ -1.66
SCN3A-203ENST00000409101 APOFQ13790 326 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 TSC22D1Q15714 1073 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 TSTQ16762 297 aaKnown RBP4.7□□□□□ -1.66
SCN3A-203ENST00000409101 RGS21Q2M5E4 152 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 CCSAPQ6IQ19 270 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-203ENST00000409101 CPEB2Q7Z5Q1 589 aaKnown RBP4.7□□□□□ -1.66
SCN3A-203ENST00000409101 PACRGLQ8N7B6 248 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 OR13J1Q8NGT2 312 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 CANT1Q8WVQ1 401 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 STON2Q8WXE9 905 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 S100A16Q96FQ6 103 aaKnown RBP4.7□□□□□ -1.66
SCN3A-203ENST00000409101 PDLIM5Q96HC4 596 aaKnown RBP4.7□□□□□ -1.66
SCN3A-203ENST00000409101 MENTQ9BUN1 341 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 ZNF446Q9NWS9 450 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 RDH8Q9NYR8 311 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 INTS6Q9UL03 887 aaKnown RBP4.7□□□□□ -1.66
SCN3A-203ENST00000409101 CARD8Q9Y2G2 431 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 ZNF337Q9Y3M9 751 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 TSC22D4Q9Y3Q8 395 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 ATP23Q9Y6H3 246 aa4.7□□□□□ -1.66
SCN3A-203ENST00000409101 FAM240BA0A1B0GVZ2 78 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 STK17BO94768 372 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 HMGN2P05204 90 aaKnown RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 GSTT2P0CG29 244 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 MYF5P13349 255 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 TBC1D28Q2M2D7 210 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 PRAMEF17Q5VTA0 474 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 CROCCP3Q8IVE0 287 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 LRRC18Q8N456 261 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 TMEM203Q969S6 136 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 WBP2Q969T9 261 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 VRK1Q99986 396 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 DPH1Q9BZG8 443 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 UBAP1Q9NZ09 502 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 IGHV1OR15-9A0A0B4J2B8 117 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 SPTY2D1-AS1A0A0U1RR47 76 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 SLC35F4A4IF30 521 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 FABP12A6NFH5 140 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 TBX10O75333 385 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 DIRAS3O95661 229 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 TSPAN12O95859 305 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 TP53P04637 393 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 GSTT1P30711 240 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 NUDT6P53370 316 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 GLO1Q04760 184 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 ANKDD1AQ495B1 522 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 C4orf46Q504U0 113 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 HSD17B12Q53GQ0 312 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 TMEM207Q6UWW9 146 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 RBMS3Q6XE24 437 aaKnown RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 SLC46A3Q7Z3Q1 461 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 METTL4Q8N3J2 472 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 PHTF2Q8N3S3 785 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 SMRP1Q8NCR6 262 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 LKAAEAR1Q8TD35 194 aa4.69□□□□□ -1.66
SCN3A-203ENST00000409101 SLC7A6OSQ96CW6 309 aaPredicted RBP4.69□□□□□ -1.66
SCN3A-203ENST00000409101 NUDT22Q9BRQ3 303 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms