RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 SLC51BQ86UW2 128 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 GLB1L2Q8IW92 636 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 NETO2Q8NC67 525 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 LILRB4Q8NHJ6 448 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 LYSMD1Q96S90 227 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 DPH7Q9BTV6 452 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 GPR174Q9BXC1 333 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 NMNAT2Q9BZQ4 307 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 OR52A5Q9H2C5 316 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 GSTO2Q9H4Y5 243 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 FBRSL1Q9HCM7 1045 aaKnown RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 DMRT3Q9NQL9 472 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 INIPQ9NRY2 104 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 GFOD1Q9NXC2 390 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 RNF150Q9ULK6 438 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 NDRG2Q9UN36 371 aaKnown RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 KRBA1A5PL33 1030 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 TVP23AA6NH52 213 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 A6NLC8 198 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 C4orf47A7E2U8 309 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 IMPA2O14732 288 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 DFFBO76075 338 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 OR2T7P0C7T2 308 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 JMJD7P0C870 316 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 TCEA1P23193 301 aaKnown RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 ITGB7P26010 798 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 KCNJ5P48544 419 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 PTH2RP49190 550 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 BMXP51813 675 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 SEC13P55735 322 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 UBXN2BQ14CS0 331 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 PCK2Q16822 640 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 PGGHGQ32M88 737 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 LY6G5CQ5SRR4 150 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 PHF19Q5T6S3 580 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 PXDC1Q5TGL8 231 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 TAS1R3Q7RTX0 852 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 IGDCC3Q8IVU1 814 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 SULF2Q8IWU5 870 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 FAM160A2Q8N612 972 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 OR2T27Q8NH04 317 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 OR52N1Q8NH53 320 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 HMGB4Q8WW32 186 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 KCNA7Q96RP8 456 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 UBL7Q96S82 380 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CLMPQ9H6B4 373 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 PARPBPQ9NWS1 579 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 SLC17A6Q9P2U8 582 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 MEIOCA2RUB1 952 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 METTL15A6NJ78 407 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 ARAFP10398 606 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 APLNRP35414 380 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 SSBP1Q04837 148 aaKnown RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 PLK5Q496M5 336 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 DEFB132Q7Z7B7 95 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 NAA40Q86UY6 237 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 TCEAL8Q8IYN2 117 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CMTM8Q8IZV2 173 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 OR4M1Q8NGD0 313 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 NETO1Q8TDF5 533 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 PXYLP1Q8TE99 480 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CAPNS2Q96L46 248 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 SFXN2Q96NB2 322 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 GAL3ST1Q99999 423 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 IL17CQ9P0M4 197 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 MUTYHQ9UIF7 546 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 KCNK6Q9Y257 313 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 ZNF281Q9Y2X9 895 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CEPT1Q9Y6K0 416 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 LOC105369274A0A096LPK9 316 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 BEST1O76090 585 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 FGF18O76093 207 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 FOSL2P15408 326 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 NTSR1P30989 418 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 DHPSP49366 369 aaPredicted RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 TMEM41BQ5BJD5 291 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 GPR157Q5UAW9 335 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 SLX4IPQ5VYV7 408 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 TXNDC8Q6A555 127 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 ENPP6Q6UWR7 440 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 TECPR1Q7Z6L1 1165 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 IGFN1Q86VF2 1251 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 MKXQ8IYA7 352 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 OR4N4Q8N0Y3 316 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CLDN19Q8N6F1 224 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 OR8J2Q8NGG1 315 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 OR51T1Q8NGJ9 327 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 OR8K3Q8NH51 312 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CD99L2Q8TCZ2 262 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 RNF141Q8WVD5 230 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CLSTN3Q9BQT9 956 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 SEC22CQ9BRL7 303 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CNTNAP3Q9BZ76 1288 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 RBFOX1Q9NWB1 397 aaKnown RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 NXT1Q9UKK6 140 aaKnown RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 MCTS1Q9ULC4 181 aaKnown RBP5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CAMK2AQ9UQM7 478 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CORINQ9Y5Q5 1042 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 CD8B2A6NJW9 211 aa5.75□□□□□ -1.49
SCN1A-203ENST00000409050 EEF1E1-BLOC1S5C9J1V9 151 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms