RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TBL1XR1Q9BZK7 514 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 HRH4Q9H3N8 390 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 DPEP2Q9H4A9 486 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 GPR32O75388 356 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 AMY2BP19961 511 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 IL13RA1P78552 427 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 CTSL3PQ5NE16 218 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 GLB1L2Q8IW92 636 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 OR2T4Q8NH00 348 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 LURAP1Q96LR2 239 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 ZNF587Q96SQ5 575 aaPredicted RBP16.65■□□□□ 0.26
SMPD4-202ENST00000409031 DPH1Q9BZG8 443 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 NPFFR2Q9Y5X5 522 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 TOPAZ1Q8N9V7 1692 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 NRXN3Q9Y4C0 1643 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 TMEM129A0AVI4 362 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 TARM1B6A8C7 271 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 LAG3P18627 525 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 TAS2R19P59542 299 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.65■□□□□ 0.26
SMPD4-202ENST00000409031 SLC35F2Q8IXU6 374 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 CMTM8Q8IZV2 173 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 ZNF565Q8N9K5 539 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 ORAI3Q9BRQ5 295 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 VNN3Q9NY84 501 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 CYP8B1Q9UNU6 501 aa16.65■□□□□ 0.26
SMPD4-202ENST00000409031 RGPD8O14715 1765 aaPredicted RBP16.64■□□□□ 0.26
SMPD4-202ENST00000409031 D6RAR5 112 aa16.64■□□□□ 0.26
SMPD4-202ENST00000409031 NDUFB2O95178 105 aa16.64■□□□□ 0.26
SMPD4-202ENST00000409031 TP53P04637 393 aaPredicted RBP16.64■□□□□ 0.26
SMPD4-202ENST00000409031 SNRPBP14678 240 aaKnown RBP16.64■□□□□ 0.26
SMPD4-202ENST00000409031 HMGN3Q15651 99 aa16.64■□□□□ 0.26
SMPD4-202ENST00000409031 ALG1LQ6GMV1 187 aa16.64■□□□□ 0.26
SMPD4-202ENST00000409031 PRSS42Q7Z5A4 293 aa16.64■□□□□ 0.26
SMPD4-202ENST00000409031 CREB3L4Q8TEY5 395 aa16.64■□□□□ 0.26
SMPD4-202ENST00000409031 HMGB4Q8WW32 186 aa16.64■□□□□ 0.26
SMPD4-202ENST00000409031 C12orf57Q99622 126 aa16.64■□□□□ 0.26
SMPD4-202ENST00000409031 TMEM175Q9BSA9 504 aa16.64■□□□□ 0.26
SMPD4-202ENST00000409031 SMCO4Q9NRQ5 59 aa16.64■□□□□ 0.26
SMPD4-202ENST00000409031 NDUFB11Q9NX14 153 aa16.64■□□□□ 0.26
SMPD4-202ENST00000409031 SLC9B1P1A6NJY1 282 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 GIPP09681 153 aaPredicted RBP16.64■□□□□ 0.25
SMPD4-202ENST00000409031 AHRP35869 848 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 MLIPQ5VWP3 458 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 TXNDC8Q6A555 127 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 GPR135Q8IZ08 494 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 EID2Q8N6I1 236 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 STEAP2Q8NFT2 490 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 SH3RF2Q8TEC5 729 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 DUSP19Q8WTR2 217 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 ZNF559Q9BR84 538 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 IFNA1P01562 189 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 TPOP07202 933 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 SHC1P29353 583 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 PER3P56645 1201 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 CLLU1Q5K131 121 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 TEX261Q6UWH6 196 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 OR52N1Q8NH53 320 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 ZMYND19Q96E35 227 aaPredicted RBP16.64■□□□□ 0.25
SMPD4-202ENST00000409031 KIF25Q9UIL4 384 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 U3KQ87 197 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 CDHR4A6H8M9 788 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 RDH16O75452 317 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 ARNTP27540 789 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 SLC19A1P41440 591 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 SPINT3P49223 89 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 CCR6P51684 374 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 NKPD1Q17RQ9 610 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 ANKRD34AQ69YU3 496 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 SLC16A12Q6ZSM3 486 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 PMM1Q92871 262 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 C20orf85Q9H1P6 137 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 C1GALT1Q9NS00 363 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 C5P01031 1676 aa16.64■□□□□ 0.25
SMPD4-202ENST00000409031 I6L893 689 aaPredicted RBP16.63■□□□□ 0.25
SMPD4-202ENST00000409031 COCHO43405 550 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 S100A8P05109 93 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 ASGR2P07307 311 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 CDK2P24941 298 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 GRPRP30550 384 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 OC90Q02509 493 aaPredicted RBP16.63■□□□□ 0.25
SMPD4-202ENST00000409031 CHAF1BQ13112 559 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 DECR1Q16698 335 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 PAN3Q58A45 887 aaKnown RBP16.63■□□□□ 0.25
SMPD4-202ENST00000409031 FCRLAQ7L513 359 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 SCD5Q86SK9 330 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 PHOSPHO1Q8TCT1 267 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 SCGB1C1Q8TD33 95 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 LMF1Q96S06 567 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 PITX2Q99697 317 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 DMRT3Q9NQL9 472 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 CCKBRP32239 447 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 OR4C11Q6IEV9 310 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 CRTC1Q6UUV9 634 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 C17orf107Q6ZR85 190 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 SLC16A9Q7RTY1 509 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 LRRC25Q8N386 305 aaPredicted RBP16.63■□□□□ 0.25
SMPD4-202ENST00000409031 RNF141Q8WVD5 230 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 ACTRT3Q9BYD9 372 aa16.63■□□□□ 0.25
SMPD4-202ENST00000409031 SLC25A18Q9H1K4 315 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms